Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox18P43680 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sox18P43680 Speer4f2-201ENSMUST00000166086 1278 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Sox18P43680 Gm20854-201ENSMUST00000178889 1002 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Sox18P43680 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.84□□□□□ -0.35
Sox18P43680 Gm34767-201ENSMUST00000191813 1062 ntBASIC12.84□□□□□ -0.35
Sox18P43680 Gm43830-201ENSMUST00000198760 1067 ntBASIC12.84□□□□□ -0.35
Sox18P43680 Gm43066-201ENSMUST00000199589 1260 ntBASIC12.84□□□□□ -0.35
Sox18P43680 Gm6649-201ENSMUST00000199743 1165 ntBASIC12.84□□□□□ -0.35
Sox18P43680 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox18P43680 Gm45072-201ENSMUST00000208673 929 ntBASIC12.84□□□□□ -0.35
Sox18P43680 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Sox18P43680 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12.84□□□□□ -0.35
Sox18P43680 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC12.84□□□□□ -0.35
Sox18P43680 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox18P43680 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox18P43680 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Sox18P43680 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Sox18P43680 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox18P43680 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox18P43680 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Sox18P43680 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox18P43680 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox18P43680 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Sox18P43680 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox18P43680 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sox18P43680 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Sox18P43680 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sox18P43680 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox18P43680 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Sox18P43680 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.35
Sox18P43680 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Sox18P43680 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Sox18P43680 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Sox18P43680 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox18P43680 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox18P43680 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox18P43680 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sox18P43680 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox18P43680 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox18P43680 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
Sox18P43680 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox18P43680 Gm22709-201ENSMUST00000116893 111 ntBASIC12.83□□□□□ -0.36
Sox18P43680 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.83□□□□□ -0.36
Sox18P43680 Gm11964-201ENSMUST00000120982 444 ntBASIC12.83□□□□□ -0.36
Sox18P43680 Rpa3-201ENSMUST00000012627 670 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox18P43680 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sox18P43680 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sox18P43680 Gm12718-202ENSMUST00000156144 660 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sox18P43680 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.83□□□□□ -0.36
Sox18P43680 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Sox18P43680 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC12.83□□□□□ -0.36
Sox18P43680 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.83□□□□□ -0.36
Sox18P43680 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox18P43680 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox18P43680 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox18P43680 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sox18P43680 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Sox18P43680 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox18P43680 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox18P43680 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox18P43680 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox18P43680 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.83□□□□□ -0.36
Sox18P43680 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox18P43680 Zeb2os-201ENSMUST00000127150 1305 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sox18P43680 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.83□□□□□ -0.36
Sox18P43680 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox18P43680 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox18P43680 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sox18P43680 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox18P43680 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sox18P43680 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox18P43680 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.82□□□□□ -0.36
Sox18P43680 4930589L23Rik-201ENSMUST00000091023 1364 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sox18P43680 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sox18P43680 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.82□□□□□ -0.36
Sox18P43680 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox18P43680 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Sox18P43680 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sox18P43680 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox18P43680 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox18P43680 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox18P43680 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.82□□□□□ -0.36
Sox18P43680 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox18P43680 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox18P43680 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox18P43680 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Sox18P43680 Gm11618-201ENSMUST00000117946 267 ntBASIC12.82□□□□□ -0.36
Sox18P43680 Gm11222-201ENSMUST00000119005 738 ntBASIC12.82□□□□□ -0.36
Sox18P43680 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.82□□□□□ -0.36
Sox18P43680 Mir7032-201ENSMUST00000185154 79 ntBASIC12.82□□□□□ -0.36
Sox18P43680 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC12.82□□□□□ -0.36
Sox18P43680 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Sox18P43680 1700066B17Rik-203ENSMUST00000191299 536 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sox18P43680 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sox18P43680 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC12.82□□□□□ -0.36
Sox18P43680 Gm45186-201ENSMUST00000206874 478 ntBASIC12.82□□□□□ -0.36
Sox18P43680 Gm19208-201ENSMUST00000213861 912 ntBASIC12.82□□□□□ -0.36
Sox18P43680 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox18P43680 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 158.1 ms