Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.89□□□□□ -0.35
Tnfsf4P43488 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
Tnfsf4P43488 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
Tnfsf4P43488 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
Tnfsf4P43488 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfsf4P43488 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfsf4P43488 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Tnfsf4P43488 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.89□□□□□ -0.35
Tnfsf4P43488 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfsf4P43488 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfsf4P43488 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfsf4P43488 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfsf4P43488 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfsf4P43488 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfsf4P43488 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfsf4P43488 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfsf4P43488 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfsf4P43488 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
Tnfsf4P43488 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfsf4P43488 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Tnfsf4P43488 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.88□□□□□ -0.35
Tnfsf4P43488 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfsf4P43488 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfsf4P43488 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfsf4P43488 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.88□□□□□ -0.35
Tnfsf4P43488 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Tnfsf4P43488 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfsf4P43488 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfsf4P43488 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfsf4P43488 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfsf4P43488 Gm4875-201ENSMUST00000118257 786 ntBASIC12.88□□□□□ -0.35
Tnfsf4P43488 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.88□□□□□ -0.35
Tnfsf4P43488 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfsf4P43488 Mir7221-201ENSMUST00000184009 72 ntBASIC12.88□□□□□ -0.35
Tnfsf4P43488 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.88□□□□□ -0.35
Tnfsf4P43488 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfsf4P43488 Gm45841-201ENSMUST00000207700 164 ntBASIC12.88□□□□□ -0.35
Tnfsf4P43488 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfsf4P43488 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.88□□□□□ -0.35
Tnfsf4P43488 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfsf4P43488 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfsf4P43488 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfsf4P43488 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfsf4P43488 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Tnfsf4P43488 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfsf4P43488 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfsf4P43488 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Tnfsf4P43488 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Tnfsf4P43488 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfsf4P43488 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfsf4P43488 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tnfsf4P43488 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Tnfsf4P43488 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Tnfsf4P43488 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Tnfsf4P43488 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Tnfsf4P43488 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tnfsf4P43488 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tnfsf4P43488 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.87□□□□□ -0.35
Tnfsf4P43488 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tnfsf4P43488 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Tnfsf4P43488 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.87□□□□□ -0.35
Tnfsf4P43488 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Tnfsf4P43488 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.87□□□□□ -0.35
Tnfsf4P43488 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.87□□□□□ -0.35
Tnfsf4P43488 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.87□□□□□ -0.35
Tnfsf4P43488 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Tnfsf4P43488 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Tnfsf4P43488 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Tnfsf4P43488 Gm43575-201ENSMUST00000196420 516 ntBASIC12.87□□□□□ -0.35
Tnfsf4P43488 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.87□□□□□ -0.35
Tnfsf4P43488 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.87□□□□□ -0.35
Tnfsf4P43488 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tnfsf4P43488 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Tnfsf4P43488 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Tnfsf4P43488 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Tnfsf4P43488 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Tnfsf4P43488 Gm7775-201ENSMUST00000218871 853 ntBASIC12.87□□□□□ -0.35
Tnfsf4P43488 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tnfsf4P43488 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tnfsf4P43488 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tnfsf4P43488 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tnfsf4P43488 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tnfsf4P43488 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Tnfsf4P43488 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.87□□□□□ -0.35
Tnfsf4P43488 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Tnfsf4P43488 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Tnfsf4P43488 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Tnfsf4P43488 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tnfsf4P43488 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Tnfsf4P43488 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Tnfsf4P43488 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.87□□□□□ -0.35
Tnfsf4P43488 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.87□□□□□ -0.35
Tnfsf4P43488 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Tnfsf4P43488 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfsf4P43488 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfsf4P43488 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfsf4P43488 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfsf4P43488 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.86□□□□□ -0.35
Tnfsf4P43488 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfsf4P43488 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 85.8 ms