Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx2P43241 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx2P43241 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx2P43241 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx2P43241 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx2P43241 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx2P43241 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdx2P43241 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Cdx2P43241 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdx2P43241 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Cdx2P43241 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Cdx2P43241 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cdx2P43241 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.61□□□□□ -0.39
Cdx2P43241 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdx2P43241 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdx2P43241 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cdx2P43241 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdx2P43241 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdx2P43241 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cdx2P43241 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdx2P43241 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC12.61□□□□□ -0.39
Cdx2P43241 Gm14726-201ENSMUST00000120623 896 ntBASIC12.61□□□□□ -0.39
Cdx2P43241 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.61□□□□□ -0.39
Cdx2P43241 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdx2P43241 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.61□□□□□ -0.39
Cdx2P43241 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.61□□□□□ -0.39
Cdx2P43241 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.61□□□□□ -0.39
Cdx2P43241 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.61□□□□□ -0.39
Cdx2P43241 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.61□□□□□ -0.39
Cdx2P43241 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdx2P43241 Rps4l-202ENSMUST00000204242 789 ntBASIC12.61□□□□□ -0.39
Cdx2P43241 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC12.61□□□□□ -0.39
Cdx2P43241 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdx2P43241 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.61□□□□□ -0.39
Cdx2P43241 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
Cdx2P43241 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdx2P43241 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdx2P43241 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdx2P43241 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdx2P43241 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdx2P43241 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdx2P43241 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cdx2P43241 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.61□□□□□ -0.39
Cdx2P43241 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cdx2P43241 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdx2P43241 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Cdx2P43241 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdx2P43241 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.6□□□□□ -0.39
Cdx2P43241 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdx2P43241 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cdx2P43241 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Cdx2P43241 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdx2P43241 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cdx2P43241 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdx2P43241 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cdx2P43241 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Cdx2P43241 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdx2P43241 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.6□□□□□ -0.39
Cdx2P43241 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.6□□□□□ -0.39
Cdx2P43241 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Cdx2P43241 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Cdx2P43241 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Cdx2P43241 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.6□□□□□ -0.39
Cdx2P43241 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Cdx2P43241 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12.6□□□□□ -0.39
Cdx2P43241 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cdx2P43241 Gm7293-201ENSMUST00000216682 1007 ntBASIC12.6□□□□□ -0.39
Cdx2P43241 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.6□□□□□ -0.39
Cdx2P43241 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdx2P43241 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.6□□□□□ -0.39
Cdx2P43241 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.6□□□□□ -0.39
Cdx2P43241 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Cdx2P43241 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdx2P43241 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdx2P43241 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdx2P43241 Gm43697-201ENSMUST00000199637 2581 ntBASIC12.6□□□□□ -0.39
Cdx2P43241 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdx2P43241 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdx2P43241 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cdx2P43241 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdx2P43241 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdx2P43241 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Cdx2P43241 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Cdx2P43241 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdx2P43241 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cdx2P43241 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.59□□□□□ -0.39
Cdx2P43241 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdx2P43241 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Cdx2P43241 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Cdx2P43241 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.59□□□□□ -0.39
Cdx2P43241 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdx2P43241 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Cdx2P43241 Gm26513-201ENSMUST00000181802 2489 ntBASIC12.59□□□□□ -0.39
Cdx2P43241 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Cdx2P43241 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Cdx2P43241 Gm24830-201ENSMUST00000102024 166 ntBASIC12.59□□□□□ -0.39
Cdx2P43241 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Cdx2P43241 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.59□□□□□ -0.39
Cdx2P43241 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cdx2P43241 Gm11978-201ENSMUST00000122315 466 ntBASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms