Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
HttP42859 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC13.79□□□□□ -0.2
HttP42859 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
HttP42859 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HttP42859 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HttP42859 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HttP42859 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HttP42859 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HttP42859 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HttP42859 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HttP42859 Gm14999-201ENSMUST00000121039 624 ntBASIC13.79□□□□□ -0.2
HttP42859 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HttP42859 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
HttP42859 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
HttP42859 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HttP42859 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC13.79□□□□□ -0.2
HttP42859 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HttP42859 Gm23771-201ENSMUST00000178702 110 ntBASIC13.79□□□□□ -0.2
HttP42859 CT025602.2-201ENSMUST00000226553 772 ntBASIC13.79□□□□□ -0.2
HttP42859 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HttP42859 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HttP42859 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HttP42859 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
HttP42859 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC13.79□□□□□ -0.2
HttP42859 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
HttP42859 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HttP42859 Gm5621-201ENSMUST00000187303 640 ntBASIC13.79□□□□□ -0.2
HttP42859 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
HttP42859 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HttP42859 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HttP42859 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HttP42859 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HttP42859 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HttP42859 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
HttP42859 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.78□□□□□ -0.2
HttP42859 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HttP42859 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
HttP42859 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HttP42859 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
HttP42859 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
HttP42859 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HttP42859 Gm14274-201ENSMUST00000117182 615 ntBASIC13.78□□□□□ -0.2
HttP42859 Gm13668-201ENSMUST00000119237 1001 ntBASIC13.78□□□□□ -0.2
HttP42859 Gm6397-201ENSMUST00000161973 1069 ntBASIC13.78□□□□□ -0.2
HttP42859 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
HttP42859 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
HttP42859 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC13.78□□□□□ -0.2
HttP42859 Gm45925-201ENSMUST00000218882 744 ntBASIC13.78□□□□□ -0.2
HttP42859 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HttP42859 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HttP42859 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HttP42859 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.78□□□□□ -0.2
HttP42859 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HttP42859 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HttP42859 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HttP42859 Gm15036-201ENSMUST00000118880 400 ntBASIC13.78□□□□□ -0.2
HttP42859 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC13.78□□□□□ -0.2
HttP42859 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HttP42859 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HttP42859 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC13.78□□□□□ -0.2
HttP42859 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
HttP42859 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
HttP42859 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
HttP42859 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
HttP42859 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
HttP42859 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
HttP42859 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
HttP42859 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC13.78□□□□□ -0.2
HttP42859 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HttP42859 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
HttP42859 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
HttP42859 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HttP42859 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
HttP42859 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HttP42859 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
HttP42859 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.78□□□□□ -0.2
HttP42859 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HttP42859 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
HttP42859 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.78□□□□□ -0.2
HttP42859 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HttP42859 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
HttP42859 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
HttP42859 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
HttP42859 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
HttP42859 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.77□□□□□ -0.2
HttP42859 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC13.77□□□□□ -0.2
HttP42859 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC13.77□□□□□ -0.2
HttP42859 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.77□□□□□ -0.2
HttP42859 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
HttP42859 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.77□□□□□ -0.2
HttP42859 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
HttP42859 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
HttP42859 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
HttP42859 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
HttP42859 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.77□□□□□ -0.2
HttP42859 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.77□□□□□ -0.2
HttP42859 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
HttP42859 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
HttP42859 Gm22144-201ENSMUST00000157402 102 ntBASIC13.77□□□□□ -0.21
HttP42859 Mir8115-201ENSMUST00000184992 119 ntBASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms