Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.23□□□□□ -0.45
Nkx2-2P42586 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-2P42586 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-2P42586 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-2P42586 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx2-2P42586 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-2P42586 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-2P42586 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-2P42586 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-2P42586 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-2P42586 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-2P42586 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.22□□□□□ -0.45
Nkx2-2P42586 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-2P42586 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-2P42586 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.22□□□□□ -0.45
Nkx2-2P42586 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-2P42586 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-2P42586 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-2P42586 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-2P42586 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-2P42586 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-2P42586 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.22□□□□□ -0.45
Nkx2-2P42586 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-2P42586 Gm12928-201ENSMUST00000117115 573 ntBASIC12.22□□□□□ -0.45
Nkx2-2P42586 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-2P42586 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.22□□□□□ -0.45
Nkx2-2P42586 Gm23984-201ENSMUST00000157139 203 ntBASIC12.22□□□□□ -0.45
Nkx2-2P42586 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-2P42586 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.22□□□□□ -0.45
Nkx2-2P42586 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-2P42586 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Nkx2-2P42586 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.22□□□□□ -0.45
Nkx2-2P42586 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.22□□□□□ -0.45
Nkx2-2P42586 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-2P42586 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-2P42586 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-2P42586 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC12.22□□□□□ -0.45
Nkx2-2P42586 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-2P42586 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-2P42586 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx2-2P42586 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx2-2P42586 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.21□□□□□ -0.45
Nkx2-2P42586 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx2-2P42586 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.21□□□□□ -0.45
Nkx2-2P42586 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx2-2P42586 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.21□□□□□ -0.45
Nkx2-2P42586 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.21□□□□□ -0.45
Nkx2-2P42586 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx2-2P42586 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx2-2P42586 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Nkx2-2P42586 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx2-2P42586 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx2-2P42586 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.21□□□□□ -0.45
Nkx2-2P42586 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.21□□□□□ -0.45
Nkx2-2P42586 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.21□□□□□ -0.45
Nkx2-2P42586 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.21□□□□□ -0.45
Nkx2-2P42586 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.21□□□□□ -0.45
Nkx2-2P42586 Gm19931-201ENSMUST00000198920 368 ntBASIC12.21□□□□□ -0.45
Nkx2-2P42586 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.21□□□□□ -0.45
Nkx2-2P42586 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx2-2P42586 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx2-2P42586 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx2-2P42586 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Nkx2-2P42586 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx2-2P42586 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx2-2P42586 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.21□□□□□ -0.45
Nkx2-2P42586 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nkx2-2P42586 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nkx2-2P42586 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nkx2-2P42586 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nkx2-2P42586 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nkx2-2P42586 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nkx2-2P42586 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Nkx2-2P42586 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nkx2-2P42586 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nkx2-2P42586 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nkx2-2P42586 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nkx2-2P42586 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nkx2-2P42586 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-2P42586 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-2P42586 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-2P42586 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-2P42586 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-2P42586 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-2P42586 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Nkx2-2P42586 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-2P42586 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-2P42586 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-2P42586 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-2P42586 Gm6152-201ENSMUST00000151704 340 ntBASIC12.2□□□□□ -0.46
Nkx2-2P42586 Gm9908-201ENSMUST00000211534 448 ntBASIC12.2□□□□□ -0.46
Nkx2-2P42586 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.2□□□□□ -0.46
Nkx2-2P42586 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.2□□□□□ -0.46
Nkx2-2P42586 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-2P42586 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
Nkx2-2P42586 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-2P42586 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-2P42586 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.2□□□□□ -0.46
Nkx2-2P42586 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-2P42586 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms