Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chd1P40201 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chd1P40201 Gm12623-201ENSMUST00000119849 1983 ntBASIC19.53■□□□□ 0.72
Chd1P40201 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Chd1P40201 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chd1P40201 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC19.53■□□□□ 0.72
Chd1P40201 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC19.53■□□□□ 0.72
Chd1P40201 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Chd1P40201 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
Chd1P40201 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chd1P40201 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chd1P40201 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chd1P40201 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC19.53■□□□□ 0.72
Chd1P40201 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Chd1P40201 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chd1P40201 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC19.52■□□□□ 0.72
Chd1P40201 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chd1P40201 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chd1P40201 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Chd1P40201 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chd1P40201 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC19.52■□□□□ 0.72
Chd1P40201 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chd1P40201 Gm43598-201ENSMUST00000202482 2479 ntBASIC19.52■□□□□ 0.72
Chd1P40201 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chd1P40201 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chd1P40201 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chd1P40201 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Chd1P40201 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC19.52■□□□□ 0.72
Chd1P40201 AC166341.2-201ENSMUST00000220571 120 ntBASIC19.52■□□□□ 0.72
Chd1P40201 AC156501.1-201ENSMUST00000228219 270 ntBASIC19.52■□□□□ 0.72
Chd1P40201 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chd1P40201 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chd1P40201 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chd1P40201 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Chd1P40201 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Chd1P40201 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Chd1P40201 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chd1P40201 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chd1P40201 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC19.51■□□□□ 0.71
Chd1P40201 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC19.51■□□□□ 0.71
Chd1P40201 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Chd1P40201 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Chd1P40201 AC159376.1-201ENSMUST00000218504 630 ntBASIC19.51■□□□□ 0.71
Chd1P40201 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC19.51■□□□□ 0.71
Chd1P40201 Mir483-201ENSMUST00000093631 73 ntBASIC19.51■□□□□ 0.71
Chd1P40201 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Chd1P40201 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chd1P40201 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC19.51■□□□□ 0.71
Chd1P40201 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chd1P40201 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chd1P40201 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chd1P40201 Gm11960-202ENSMUST00000181063 2858 ntBASIC19.51■□□□□ 0.71
Chd1P40201 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chd1P40201 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Chd1P40201 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Chd1P40201 Gm16071-201ENSMUST00000119589 793 ntBASIC19.51■□□□□ 0.71
Chd1P40201 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Chd1P40201 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC19.51■□□□□ 0.71
Chd1P40201 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC19.51■□□□□ 0.71
Chd1P40201 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chd1P40201 Gm17826-201ENSMUST00000189720 798 ntBASIC19.51■□□□□ 0.71
Chd1P40201 Gm37458-201ENSMUST00000194055 410 ntBASIC19.51■□□□□ 0.71
Chd1P40201 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC19.51■□□□□ 0.71
Chd1P40201 Gm4157-201ENSMUST00000211647 679 ntBASIC19.51■□□□□ 0.71
Chd1P40201 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chd1P40201 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Chd1P40201 Gm10288-201ENSMUST00000084614 537 ntBASIC19.51■□□□□ 0.71
Chd1P40201 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chd1P40201 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chd1P40201 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chd1P40201 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Chd1P40201 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chd1P40201 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chd1P40201 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Chd1P40201 Gm16425-201ENSMUST00000118143 3130 ntBASIC19.5■□□□□ 0.71
Chd1P40201 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC19.5■□□□□ 0.71
Chd1P40201 Gm4726-201ENSMUST00000135604 736 ntBASIC19.5■□□□□ 0.71
Chd1P40201 Gm6019-201ENSMUST00000148369 736 ntBASIC19.5■□□□□ 0.71
Chd1P40201 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chd1P40201 Mir7677-201ENSMUST00000184226 67 ntBASIC19.5■□□□□ 0.71
Chd1P40201 AC153954.1-201ENSMUST00000216959 255 ntBASIC19.5■□□□□ 0.71
Chd1P40201 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC19.5■□□□□ 0.71
Chd1P40201 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chd1P40201 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chd1P40201 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chd1P40201 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chd1P40201 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chd1P40201 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chd1P40201 Mmp14-206ENSMUST00000225641 3238 ntBASIC19.5■□□□□ 0.71
Chd1P40201 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chd1P40201 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chd1P40201 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chd1P40201 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chd1P40201 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chd1P40201 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Chd1P40201 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC19.49■□□□□ 0.71
Chd1P40201 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Chd1P40201 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Chd1P40201 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC19.49■□□□□ 0.71
Chd1P40201 Gm12969-201ENSMUST00000120199 1004 ntBASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms