Protein–RNA interactions for Protein: P35278

Rab5c, Ras-related protein Rab-5C, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab5cP35278 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC10.84□□□□□ -0.67
Rab5cP35278 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC10.84□□□□□ -0.67
Rab5cP35278 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Rab5cP35278 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rab5cP35278 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rab5cP35278 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rab5cP35278 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rab5cP35278 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rab5cP35278 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rab5cP35278 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rab5cP35278 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rab5cP35278 AC159195.1-201ENSMUST00000225867 2086 ntBASIC10.84□□□□□ -0.67
Rab5cP35278 Gm43051-201ENSMUST00000201096 2678 ntBASIC10.84□□□□□ -0.67
Rab5cP35278 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rab5cP35278 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rab5cP35278 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rab5cP35278 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rab5cP35278 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rab5cP35278 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rab5cP35278 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC10.84□□□□□ -0.67
Rab5cP35278 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rab5cP35278 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rab5cP35278 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Rab5cP35278 Gm43721-201ENSMUST00000199677 2313 ntBASIC10.84□□□□□ -0.67
Rab5cP35278 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rab5cP35278 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rab5cP35278 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rab5cP35278 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Rab5cP35278 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rab5cP35278 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC10.83□□□□□ -0.67
Rab5cP35278 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rab5cP35278 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rab5cP35278 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC10.83□□□□□ -0.68
Rab5cP35278 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rab5cP35278 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rab5cP35278 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rab5cP35278 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rab5cP35278 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rab5cP35278 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rab5cP35278 CT009757.3-201ENSMUST00000223367 2320 ntBASIC10.83□□□□□ -0.68
Rab5cP35278 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rab5cP35278 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rab5cP35278 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rab5cP35278 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rab5cP35278 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rab5cP35278 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rab5cP35278 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rab5cP35278 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
Rab5cP35278 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC10.83□□□□□ -0.68
Rab5cP35278 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC10.83□□□□□ -0.68
Rab5cP35278 Gm4899-201ENSMUST00000178708 719 ntBASIC10.83□□□□□ -0.68
Rab5cP35278 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC10.83□□□□□ -0.68
Rab5cP35278 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Rab5cP35278 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rab5cP35278 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rab5cP35278 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rab5cP35278 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rab5cP35278 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC10.83□□□□□ -0.68
Rab5cP35278 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC10.83□□□□□ -0.68
Rab5cP35278 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rab5cP35278 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Rab5cP35278 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rab5cP35278 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Rab5cP35278 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Rab5cP35278 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rab5cP35278 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rab5cP35278 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rab5cP35278 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rab5cP35278 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rab5cP35278 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC10.83□□□□□ -0.68
Rab5cP35278 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rab5cP35278 Gm43102-201ENSMUST00000201004 2324 ntBASIC10.83□□□□□ -0.68
Rab5cP35278 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rab5cP35278 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rab5cP35278 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rab5cP35278 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Rab5cP35278 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rab5cP35278 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rab5cP35278 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rab5cP35278 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rab5cP35278 AC166574.4-201ENSMUST00000227165 1937 ntBASIC10.82□□□□□ -0.68
Rab5cP35278 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rab5cP35278 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rab5cP35278 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rab5cP35278 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rab5cP35278 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rab5cP35278 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rab5cP35278 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rab5cP35278 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Rab5cP35278 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rab5cP35278 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rab5cP35278 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rab5cP35278 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rab5cP35278 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Rab5cP35278 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rab5cP35278 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC10.82□□□□□ -0.68
Rab5cP35278 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC10.82□□□□□ -0.68
Rab5cP35278 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rab5cP35278 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
Rab5cP35278 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms