Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Mmp13P33435 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Mmp13P33435 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Mmp13P33435 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Mmp13P33435 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Mmp13P33435 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Mmp13P33435 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Mmp13P33435 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Mmp13P33435 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Mmp13P33435 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Mmp13P33435 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Mmp13P33435 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Mmp13P33435 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Mmp13P33435 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Mmp13P33435 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.66□□□□□ -0.22
Mmp13P33435 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Mmp13P33435 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.66□□□□□ -0.22
Mmp13P33435 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.66□□□□□ -0.22
Mmp13P33435 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Mmp13P33435 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Mmp13P33435 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Mmp13P33435 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Mmp13P33435 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Mmp13P33435 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Mmp13P33435 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Mmp13P33435 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Mmp13P33435 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Mmp13P33435 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Mmp13P33435 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Mmp13P33435 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Mmp13P33435 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.66□□□□□ -0.22
Mmp13P33435 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Mmp13P33435 Gm13385-201ENSMUST00000121089 220 ntBASIC13.66□□□□□ -0.22
Mmp13P33435 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Mmp13P33435 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Mmp13P33435 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.66□□□□□ -0.22
Mmp13P33435 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Mmp13P33435 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.66□□□□□ -0.22
Mmp13P33435 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.66□□□□□ -0.22
Mmp13P33435 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Mmp13P33435 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.66□□□□□ -0.22
Mmp13P33435 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Mmp13P33435 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Mmp13P33435 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Mmp13P33435 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Mmp13P33435 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Mmp13P33435 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Mmp13P33435 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Mmp13P33435 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Mmp13P33435 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
Mmp13P33435 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Mmp13P33435 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Mmp13P33435 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Mmp13P33435 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Mmp13P33435 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Mmp13P33435 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Mmp13P33435 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.65□□□□□ -0.22
Mmp13P33435 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
Mmp13P33435 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Mmp13P33435 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Mmp13P33435 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Mmp13P33435 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Mmp13P33435 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Mmp13P33435 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Mmp13P33435 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.65□□□□□ -0.22
Mmp13P33435 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.65□□□□□ -0.22
Mmp13P33435 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Mmp13P33435 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Mmp13P33435 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Mmp13P33435 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Mmp13P33435 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Mmp13P33435 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Mmp13P33435 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Mmp13P33435 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.65□□□□□ -0.22
Mmp13P33435 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Mmp13P33435 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Mmp13P33435 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.65□□□□□ -0.22
Mmp13P33435 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Mmp13P33435 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Mmp13P33435 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Mmp13P33435 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Mmp13P33435 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.64□□□□□ -0.23
Mmp13P33435 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Mmp13P33435 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Mmp13P33435 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Mmp13P33435 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Mmp13P33435 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Mmp13P33435 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Mmp13P33435 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.64□□□□□ -0.23
Mmp13P33435 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Mmp13P33435 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Mmp13P33435 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.64□□□□□ -0.23
Mmp13P33435 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Mmp13P33435 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.64□□□□□ -0.23
Mmp13P33435 Gm15678-201ENSMUST00000117573 960 ntBASIC13.64□□□□□ -0.23
Mmp13P33435 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.64□□□□□ -0.23
Mmp13P33435 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Mmp13P33435 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Mmp13P33435 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.64□□□□□ -0.23
Mmp13P33435 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms