Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nedd8P29595 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nedd8P29595 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nedd8P29595 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nedd8P29595 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nedd8P29595 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nedd8P29595 AA543401-201ENSMUST00000164248 1269 ntBASIC12.28□□□□□ -0.44
Nedd8P29595 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Nedd8P29595 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Nedd8P29595 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nedd8P29595 Gm18027-201ENSMUST00000218947 619 ntBASIC12.28□□□□□ -0.44
Nedd8P29595 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nedd8P29595 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nedd8P29595 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nedd8P29595 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nedd8P29595 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nedd8P29595 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Nedd8P29595 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nedd8P29595 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.28□□□□□ -0.44
Nedd8P29595 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nedd8P29595 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Nedd8P29595 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Nedd8P29595 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nedd8P29595 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nedd8P29595 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nedd8P29595 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nedd8P29595 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nedd8P29595 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Nedd8P29595 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.44
Nedd8P29595 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
Nedd8P29595 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nedd8P29595 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nedd8P29595 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nedd8P29595 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nedd8P29595 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.27□□□□□ -0.44
Nedd8P29595 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.44
Nedd8P29595 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Nedd8P29595 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nedd8P29595 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Nedd8P29595 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nedd8P29595 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Nedd8P29595 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nedd8P29595 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nedd8P29595 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.27□□□□□ -0.44
Nedd8P29595 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nedd8P29595 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nedd8P29595 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nedd8P29595 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC12.27□□□□□ -0.45
Nedd8P29595 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nedd8P29595 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nedd8P29595 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC12.27□□□□□ -0.45
Nedd8P29595 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Nedd8P29595 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC12.27□□□□□ -0.45
Nedd8P29595 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nedd8P29595 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nedd8P29595 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nedd8P29595 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nedd8P29595 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nedd8P29595 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nedd8P29595 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.27□□□□□ -0.45
Nedd8P29595 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Nedd8P29595 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nedd8P29595 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nedd8P29595 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nedd8P29595 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nedd8P29595 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nedd8P29595 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nedd8P29595 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nedd8P29595 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nedd8P29595 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nedd8P29595 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Nedd8P29595 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nedd8P29595 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nedd8P29595 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nedd8P29595 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nedd8P29595 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.26□□□□□ -0.45
Nedd8P29595 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.26□□□□□ -0.45
Nedd8P29595 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Nedd8P29595 Gm27301-201ENSMUST00000184012 127 ntBASIC12.26□□□□□ -0.45
Nedd8P29595 Thap2-203ENSMUST00000218989 527 ntBASIC12.26□□□□□ -0.45
Nedd8P29595 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC12.26□□□□□ -0.45
Nedd8P29595 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nedd8P29595 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Nedd8P29595 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nedd8P29595 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Nedd8P29595 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nedd8P29595 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.26□□□□□ -0.45
Nedd8P29595 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nedd8P29595 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nedd8P29595 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nedd8P29595 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nedd8P29595 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nedd8P29595 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nedd8P29595 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nedd8P29595 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nedd8P29595 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nedd8P29595 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nedd8P29595 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nedd8P29595 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nedd8P29595 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms