Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.91□□□□□ -0.02
Col2a1P28481 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Col2a1P28481 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col2a1P28481 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col2a1P28481 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col2a1P28481 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col2a1P28481 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC14.91□□□□□ -0.02
Col2a1P28481 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col2a1P28481 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col2a1P28481 AC165260.3-202ENSMUST00000224550 1031 ntBASIC14.91□□□□□ -0.02
Col2a1P28481 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col2a1P28481 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col2a1P28481 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col2a1P28481 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col2a1P28481 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col2a1P28481 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col2a1P28481 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col2a1P28481 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col2a1P28481 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col2a1P28481 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col2a1P28481 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
Col2a1P28481 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Col2a1P28481 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col2a1P28481 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col2a1P28481 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col2a1P28481 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col2a1P28481 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col2a1P28481 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col2a1P28481 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col2a1P28481 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC14.91□□□□□ -0.02
Col2a1P28481 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col2a1P28481 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col2a1P28481 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col2a1P28481 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col2a1P28481 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col2a1P28481 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col2a1P28481 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col2a1P28481 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.9□□□□□ -0.02
Col2a1P28481 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col2a1P28481 Mir877-201ENSMUST00000104738 85 ntBASIC14.9□□□□□ -0.02
Col2a1P28481 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col2a1P28481 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col2a1P28481 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC14.9□□□□□ -0.02
Col2a1P28481 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC14.9□□□□□ -0.02
Col2a1P28481 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col2a1P28481 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col2a1P28481 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col2a1P28481 Gm6082-201ENSMUST00000215204 454 ntBASIC14.9□□□□□ -0.02
Col2a1P28481 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col2a1P28481 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col2a1P28481 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col2a1P28481 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Col2a1P28481 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col2a1P28481 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col2a1P28481 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col2a1P28481 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col2a1P28481 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col2a1P28481 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Col2a1P28481 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col2a1P28481 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col2a1P28481 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col2a1P28481 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col2a1P28481 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Col2a1P28481 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Col2a1P28481 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Col2a1P28481 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.89□□□□□ -0.03
Col2a1P28481 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC14.89□□□□□ -0.03
Col2a1P28481 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col2a1P28481 Gm12058-201ENSMUST00000118614 437 ntBASIC14.89□□□□□ -0.03
Col2a1P28481 Gm13813-201ENSMUST00000120998 787 ntBASIC14.89□□□□□ -0.03
Col2a1P28481 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC14.89□□□□□ -0.03
Col2a1P28481 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col2a1P28481 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC14.89□□□□□ -0.03
Col2a1P28481 Gm18056-201ENSMUST00000207670 568 ntBASIC14.89□□□□□ -0.03
Col2a1P28481 Gm18061-201ENSMUST00000208350 562 ntBASIC14.89□□□□□ -0.03
Col2a1P28481 Gm18063-201ENSMUST00000208529 568 ntBASIC14.89□□□□□ -0.03
Col2a1P28481 Gm18052-201ENSMUST00000208750 559 ntBASIC14.89□□□□□ -0.03
Col2a1P28481 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col2a1P28481 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Col2a1P28481 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col2a1P28481 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col2a1P28481 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col2a1P28481 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.89□□□□□ -0.03
Col2a1P28481 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col2a1P28481 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col2a1P28481 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC14.89□□□□□ -0.03
Col2a1P28481 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col2a1P28481 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col2a1P28481 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.89□□□□□ -0.03
Col2a1P28481 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
Col2a1P28481 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col2a1P28481 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col2a1P28481 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC14.89□□□□□ -0.03
Col2a1P28481 Gm23270-201ENSMUST00000104055 131 ntBASIC14.89□□□□□ -0.03
Col2a1P28481 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col2a1P28481 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col2a1P28481 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC14.89□□□□□ -0.03
Col2a1P28481 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col2a1P28481 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC14.89□□□□□ -0.03
Col2a1P28481 Gm38317-201ENSMUST00000195564 343 ntBASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms