Protein–RNA interactions for Protein: P27659

Rpl3, 60S ribosomal protein L3, mousemouse

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl3P27659 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rpl3P27659 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rpl3P27659 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.66□□□□□ -0.38
Rpl3P27659 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rpl3P27659 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpl3P27659 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpl3P27659 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpl3P27659 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.65□□□□□ -0.38
Rpl3P27659 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpl3P27659 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpl3P27659 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rpl3P27659 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpl3P27659 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpl3P27659 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpl3P27659 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpl3P27659 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rpl3P27659 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rpl3P27659 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpl3P27659 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpl3P27659 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpl3P27659 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.38
Rpl3P27659 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rpl3P27659 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpl3P27659 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Rpl3P27659 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC12.65□□□□□ -0.38
Rpl3P27659 Gm26464-201ENSMUST00000157094 305 ntBASIC12.65□□□□□ -0.38
Rpl3P27659 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Rpl3P27659 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rpl3P27659 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.65□□□□□ -0.38
Rpl3P27659 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.65□□□□□ -0.38
Rpl3P27659 Gm43094-201ENSMUST00000196549 921 ntBASIC12.65□□□□□ -0.38
Rpl3P27659 Gm19931-201ENSMUST00000198920 368 ntBASIC12.65□□□□□ -0.38
Rpl3P27659 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.65□□□□□ -0.38
Rpl3P27659 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpl3P27659 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpl3P27659 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpl3P27659 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpl3P27659 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpl3P27659 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpl3P27659 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpl3P27659 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpl3P27659 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpl3P27659 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpl3P27659 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.65□□□□□ -0.39
Rpl3P27659 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
Rpl3P27659 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Rpl3P27659 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Rpl3P27659 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rpl3P27659 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpl3P27659 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpl3P27659 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
Rpl3P27659 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.64□□□□□ -0.39
Rpl3P27659 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpl3P27659 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.64□□□□□ -0.39
Rpl3P27659 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.64□□□□□ -0.39
Rpl3P27659 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Rpl3P27659 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rpl3P27659 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpl3P27659 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpl3P27659 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC12.64□□□□□ -0.39
Rpl3P27659 Gm14719-201ENSMUST00000121891 340 ntBASIC12.64□□□□□ -0.39
Rpl3P27659 Gm15487-201ENSMUST00000122373 465 ntBASIC12.64□□□□□ -0.39
Rpl3P27659 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.64□□□□□ -0.39
Rpl3P27659 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Rpl3P27659 Gm28760-201ENSMUST00000185995 736 ntBASIC12.64□□□□□ -0.39
Rpl3P27659 Gm29667-201ENSMUST00000190817 490 ntBASIC12.64□□□□□ -0.39
Rpl3P27659 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC12.64□□□□□ -0.39
Rpl3P27659 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.64□□□□□ -0.39
Rpl3P27659 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.64□□□□□ -0.39
Rpl3P27659 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpl3P27659 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpl3P27659 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpl3P27659 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.64□□□□□ -0.39
Rpl3P27659 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Rpl3P27659 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rpl3P27659 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpl3P27659 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpl3P27659 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpl3P27659 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Rpl3P27659 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Rpl3P27659 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpl3P27659 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpl3P27659 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rpl3P27659 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpl3P27659 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpl3P27659 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rpl3P27659 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.63□□□□□ -0.39
Rpl3P27659 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.63□□□□□ -0.39
Rpl3P27659 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Rpl3P27659 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Rpl3P27659 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpl3P27659 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpl3P27659 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Rpl3P27659 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpl3P27659 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpl3P27659 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpl3P27659 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpl3P27659 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rpl3P27659 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rpl3P27659 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms