Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cd40P27512 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cd40P27512 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cd40P27512 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cd40P27512 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cd40P27512 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cd40P27512 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cd40P27512 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Cd40P27512 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cd40P27512 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cd40P27512 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cd40P27512 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cd40P27512 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cd40P27512 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Cd40P27512 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.05□□□□□ -0.48
Cd40P27512 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Cd40P27512 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cd40P27512 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.05□□□□□ -0.48
Cd40P27512 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.05□□□□□ -0.48
Cd40P27512 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Cd40P27512 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.05□□□□□ -0.48
Cd40P27512 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.05□□□□□ -0.48
Cd40P27512 Gm7287-201ENSMUST00000205267 602 ntBASIC12.05□□□□□ -0.48
Cd40P27512 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Cd40P27512 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.05□□□□□ -0.48
Cd40P27512 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.05□□□□□ -0.48
Cd40P27512 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cd40P27512 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cd40P27512 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cd40P27512 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.05□□□□□ -0.48
Cd40P27512 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cd40P27512 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cd40P27512 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Cd40P27512 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cd40P27512 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.05□□□□□ -0.48
Cd40P27512 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cd40P27512 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cd40P27512 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cd40P27512 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cd40P27512 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cd40P27512 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cd40P27512 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cd40P27512 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cd40P27512 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.05□□□□□ -0.48
Cd40P27512 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.05□□□□□ -0.48
Cd40P27512 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cd40P27512 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.05□□□□□ -0.48
Cd40P27512 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cd40P27512 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cd40P27512 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cd40P27512 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cd40P27512 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cd40P27512 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cd40P27512 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.04□□□□□ -0.48
Cd40P27512 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cd40P27512 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cd40P27512 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cd40P27512 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cd40P27512 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cd40P27512 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.04□□□□□ -0.48
Cd40P27512 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cd40P27512 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cd40P27512 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Cd40P27512 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Cd40P27512 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Cd40P27512 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Cd40P27512 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cd40P27512 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cd40P27512 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cd40P27512 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cd40P27512 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cd40P27512 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Cd40P27512 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.04□□□□□ -0.48
Cd40P27512 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cd40P27512 Gm9002-201ENSMUST00000178437 499 ntBASIC12.04□□□□□ -0.48
Cd40P27512 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.04□□□□□ -0.48
Cd40P27512 Gm19931-201ENSMUST00000198920 368 ntBASIC12.04□□□□□ -0.48
Cd40P27512 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.04□□□□□ -0.48
Cd40P27512 Gm16372-201ENSMUST00000073088 450 ntBASIC12.04□□□□□ -0.48
Cd40P27512 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cd40P27512 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cd40P27512 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cd40P27512 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cd40P27512 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.04□□□□□ -0.48
Cd40P27512 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cd40P27512 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cd40P27512 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cd40P27512 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cd40P27512 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cd40P27512 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cd40P27512 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cd40P27512 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cd40P27512 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cd40P27512 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cd40P27512 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.03□□□□□ -0.48
Cd40P27512 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.03□□□□□ -0.48
Cd40P27512 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Cd40P27512 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Cd40P27512 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Cd40P27512 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 91 ms