Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Tnfrsf1aP25118 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tnfrsf1aP25118 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tnfrsf1aP25118 AC161252.3-201ENSMUST00000225465 1549 ntBASIC11.19□□□□□ -0.62
Tnfrsf1aP25118 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tnfrsf1aP25118 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Tnfrsf1aP25118 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Tnfrsf1aP25118 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tnfrsf1aP25118 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tnfrsf1aP25118 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC11.18□□□□□ -0.62
Tnfrsf1aP25118 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tnfrsf1aP25118 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tnfrsf1aP25118 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Tnfrsf1aP25118 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tnfrsf1aP25118 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tnfrsf1aP25118 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Tnfrsf1aP25118 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tnfrsf1aP25118 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tnfrsf1aP25118 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Tnfrsf1aP25118 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tnfrsf1aP25118 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tnfrsf1aP25118 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Tnfrsf1aP25118 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tnfrsf1aP25118 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tnfrsf1aP25118 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tnfrsf1aP25118 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tnfrsf1aP25118 Gm14730-201ENSMUST00000122378 1045 ntBASIC11.18□□□□□ -0.62
Tnfrsf1aP25118 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC11.18□□□□□ -0.62
Tnfrsf1aP25118 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Tnfrsf1aP25118 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tnfrsf1aP25118 Gm9522-201ENSMUST00000182394 926 ntBASIC11.18□□□□□ -0.62
Tnfrsf1aP25118 Mir8102-201ENSMUST00000184148 139 ntBASIC11.18□□□□□ -0.62
Tnfrsf1aP25118 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Tnfrsf1aP25118 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Tnfrsf1aP25118 Gm7498-201ENSMUST00000203282 1084 ntBASIC11.18□□□□□ -0.62
Tnfrsf1aP25118 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC11.18□□□□□ -0.62
Tnfrsf1aP25118 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC11.18□□□□□ -0.62
Tnfrsf1aP25118 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC11.18□□□□□ -0.62
Tnfrsf1aP25118 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tnfrsf1aP25118 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tnfrsf1aP25118 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Tnfrsf1aP25118 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tnfrsf1aP25118 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Tnfrsf1aP25118 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tnfrsf1aP25118 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tnfrsf1aP25118 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tnfrsf1aP25118 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tnfrsf1aP25118 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.18□□□□□ -0.62
Tnfrsf1aP25118 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Tnfrsf1aP25118 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Tnfrsf1aP25118 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Tnfrsf1aP25118 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tnfrsf1aP25118 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Tnfrsf1aP25118 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Tnfrsf1aP25118 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tnfrsf1aP25118 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Tnfrsf1aP25118 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Tnfrsf1aP25118 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.18□□□□□ -0.62
Tnfrsf1aP25118 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tnfrsf1aP25118 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tnfrsf1aP25118 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Tnfrsf1aP25118 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfrsf1aP25118 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfrsf1aP25118 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.17□□□□□ -0.62
Tnfrsf1aP25118 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC11.17□□□□□ -0.62
Tnfrsf1aP25118 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Tnfrsf1aP25118 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfrsf1aP25118 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfrsf1aP25118 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfrsf1aP25118 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfrsf1aP25118 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfrsf1aP25118 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfrsf1aP25118 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfrsf1aP25118 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfrsf1aP25118 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfrsf1aP25118 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfrsf1aP25118 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfrsf1aP25118 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfrsf1aP25118 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC11.17□□□□□ -0.62
Tnfrsf1aP25118 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC11.17□□□□□ -0.62
Tnfrsf1aP25118 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC11.17□□□□□ -0.62
Tnfrsf1aP25118 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfrsf1aP25118 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfrsf1aP25118 Mir7684-201ENSMUST00000183858 60 ntBASIC11.17□□□□□ -0.62
Tnfrsf1aP25118 Mir7023-201ENSMUST00000185093 64 ntBASIC11.17□□□□□ -0.62
Tnfrsf1aP25118 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfrsf1aP25118 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfrsf1aP25118 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfrsf1aP25118 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfrsf1aP25118 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Tnfrsf1aP25118 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfrsf1aP25118 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfrsf1aP25118 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfrsf1aP25118 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfrsf1aP25118 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfrsf1aP25118 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfrsf1aP25118 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfrsf1aP25118 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Tnfrsf1aP25118 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Tnfrsf1aP25118 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms