Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgn1P18608 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgn1P18608 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgn1P18608 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgn1P18608 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgn1P18608 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgn1P18608 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgn1P18608 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Hmgn1P18608 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Hmgn1P18608 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Hmgn1P18608 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgn1P18608 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgn1P18608 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgn1P18608 Gm27772-201ENSMUST00000184900 187 ntBASIC12.19□□□□□ -0.46
Hmgn1P18608 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Hmgn1P18608 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.19□□□□□ -0.46
Hmgn1P18608 Gm43474-201ENSMUST00000196415 774 ntBASIC12.19□□□□□ -0.46
Hmgn1P18608 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgn1P18608 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgn1P18608 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgn1P18608 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgn1P18608 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgn1P18608 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgn1P18608 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgn1P18608 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgn1P18608 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgn1P18608 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgn1P18608 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.19□□□□□ -0.46
Hmgn1P18608 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Hmgn1P18608 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgn1P18608 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgn1P18608 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.19□□□□□ -0.46
Hmgn1P18608 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgn1P18608 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.19□□□□□ -0.46
Hmgn1P18608 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgn1P18608 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hmgn1P18608 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgn1P18608 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgn1P18608 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgn1P18608 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgn1P18608 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgn1P18608 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgn1P18608 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Hmgn1P18608 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.18□□□□□ -0.46
Hmgn1P18608 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgn1P18608 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.18□□□□□ -0.46
Hmgn1P18608 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgn1P18608 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Hmgn1P18608 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgn1P18608 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.18□□□□□ -0.46
Hmgn1P18608 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Hmgn1P18608 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Hmgn1P18608 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgn1P18608 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.18□□□□□ -0.46
Hmgn1P18608 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.18□□□□□ -0.46
Hmgn1P18608 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.18□□□□□ -0.46
Hmgn1P18608 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.18□□□□□ -0.46
Hmgn1P18608 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC12.18□□□□□ -0.46
Hmgn1P18608 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC12.18□□□□□ -0.46
Hmgn1P18608 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC12.18□□□□□ -0.46
Hmgn1P18608 Gm44335-201ENSMUST00000196879 141 ntBASIC12.18□□□□□ -0.46
Hmgn1P18608 Gm44297-201ENSMUST00000198304 141 ntBASIC12.18□□□□□ -0.46
Hmgn1P18608 Gm44346-201ENSMUST00000198851 141 ntBASIC12.18□□□□□ -0.46
Hmgn1P18608 Gm19931-201ENSMUST00000198920 368 ntBASIC12.18□□□□□ -0.46
Hmgn1P18608 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgn1P18608 Gm46209-201ENSMUST00000217912 553 ntBASIC12.18□□□□□ -0.46
Hmgn1P18608 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC12.18□□□□□ -0.46
Hmgn1P18608 Gm17330-201ENSMUST00000221047 165 ntBASIC12.18□□□□□ -0.46
Hmgn1P18608 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgn1P18608 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Hmgn1P18608 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgn1P18608 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgn1P18608 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Hmgn1P18608 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Hmgn1P18608 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgn1P18608 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgn1P18608 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgn1P18608 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgn1P18608 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgn1P18608 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Hmgn1P18608 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgn1P18608 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Hmgn1P18608 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Hmgn1P18608 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hmgn1P18608 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Hmgn1P18608 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hmgn1P18608 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hmgn1P18608 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hmgn1P18608 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hmgn1P18608 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hmgn1P18608 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.17□□□□□ -0.46
Hmgn1P18608 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.17□□□□□ -0.46
Hmgn1P18608 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hmgn1P18608 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.17□□□□□ -0.46
Hmgn1P18608 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Hmgn1P18608 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hmgn1P18608 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hmgn1P18608 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC12.17□□□□□ -0.46
Hmgn1P18608 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Hmgn1P18608 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms