Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Hmga1P17095 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Hmga1P17095 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Hmga1P17095 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Hmga1P17095 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.56□□□□□ -0.24
Hmga1P17095 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC13.56□□□□□ -0.24
Hmga1P17095 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hmga1P17095 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Hmga1P17095 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hmga1P17095 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hmga1P17095 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hmga1P17095 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Hmga1P17095 Olfr582-201ENSMUST00000098212 960 ntBASIC13.56□□□□□ -0.24
Hmga1P17095 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Hmga1P17095 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Hmga1P17095 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Hmga1P17095 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Hmga1P17095 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hmga1P17095 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hmga1P17095 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hmga1P17095 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Hmga1P17095 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.56□□□□□ -0.24
Hmga1P17095 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.56□□□□□ -0.24
Hmga1P17095 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Hmga1P17095 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Hmga1P17095 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Hmga1P17095 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hmga1P17095 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hmga1P17095 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.55□□□□□ -0.24
Hmga1P17095 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hmga1P17095 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hmga1P17095 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.55□□□□□ -0.24
Hmga1P17095 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.55□□□□□ -0.24
Hmga1P17095 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.55□□□□□ -0.24
Hmga1P17095 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hmga1P17095 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hmga1P17095 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Hmga1P17095 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hmga1P17095 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hmga1P17095 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC13.55□□□□□ -0.24
Hmga1P17095 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Hmga1P17095 Gm11658-201ENSMUST00000120913 1008 ntBASIC13.55□□□□□ -0.24
Hmga1P17095 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Hmga1P17095 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC13.55□□□□□ -0.24
Hmga1P17095 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC13.55□□□□□ -0.24
Hmga1P17095 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Hmga1P17095 Gm2467-201ENSMUST00000182266 1010 ntBASIC13.55□□□□□ -0.24
Hmga1P17095 Gm6981-201ENSMUST00000182467 1008 ntBASIC13.55□□□□□ -0.24
Hmga1P17095 Gm27516-201ENSMUST00000184237 98 ntBASIC13.55□□□□□ -0.24
Hmga1P17095 Gm38158-201ENSMUST00000194617 339 ntBASIC13.55□□□□□ -0.24
Hmga1P17095 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC13.55□□□□□ -0.24
Hmga1P17095 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.55□□□□□ -0.24
Hmga1P17095 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hmga1P17095 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hmga1P17095 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.55□□□□□ -0.24
Hmga1P17095 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hmga1P17095 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.55□□□□□ -0.24
Hmga1P17095 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hmga1P17095 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Hmga1P17095 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Hmga1P17095 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hmga1P17095 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Hmga1P17095 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hmga1P17095 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Hmga1P17095 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hmga1P17095 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.55□□□□□ -0.24
Hmga1P17095 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hmga1P17095 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Hmga1P17095 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hmga1P17095 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hmga1P17095 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.55□□□□□ -0.24
Hmga1P17095 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hmga1P17095 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hmga1P17095 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hmga1P17095 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Hmga1P17095 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hmga1P17095 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hmga1P17095 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Hmga1P17095 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Hmga1P17095 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Hmga1P17095 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hmga1P17095 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hmga1P17095 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hmga1P17095 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hmga1P17095 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.54□□□□□ -0.24
Hmga1P17095 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hmga1P17095 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Hmga1P17095 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC13.54□□□□□ -0.24
Hmga1P17095 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC13.54□□□□□ -0.24
Hmga1P17095 Gm42627-201ENSMUST00000197347 224 ntBASIC13.54□□□□□ -0.24
Hmga1P17095 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Hmga1P17095 Gm17383-201ENSMUST00000078739 1041 ntBASIC13.54□□□□□ -0.24
Hmga1P17095 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.54□□□□□ -0.24
Hmga1P17095 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Hmga1P17095 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hmga1P17095 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Hmga1P17095 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Hmga1P17095 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hmga1P17095 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hmga1P17095 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms