Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
Ccl3P10855 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccl3P10855 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccl3P10855 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccl3P10855 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ccl3P10855 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC11.71□□□□□ -0.53
Ccl3P10855 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC11.71□□□□□ -0.53
Ccl3P10855 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccl3P10855 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccl3P10855 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ccl3P10855 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccl3P10855 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ccl3P10855 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Ccl3P10855 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11.71□□□□□ -0.53
Ccl3P10855 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC11.71□□□□□ -0.53
Ccl3P10855 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC11.71□□□□□ -0.53
Ccl3P10855 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Ccl3P10855 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Ccl3P10855 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Ccl3P10855 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Ccl3P10855 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.71□□□□□ -0.53
Ccl3P10855 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccl3P10855 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ccl3P10855 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccl3P10855 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccl3P10855 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC11.71□□□□□ -0.53
Ccl3P10855 CT030182.1-201ENSMUST00000225935 533 ntBASIC11.71□□□□□ -0.53
Ccl3P10855 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Ccl3P10855 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Ccl3P10855 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Ccl3P10855 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Ccl3P10855 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccl3P10855 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Ccl3P10855 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccl3P10855 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Ccl3P10855 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ccl3P10855 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ccl3P10855 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Ccl3P10855 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ccl3P10855 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Ccl3P10855 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Ccl3P10855 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.54
Ccl3P10855 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Ccl3P10855 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Ccl3P10855 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC11.71□□□□□ -0.54
Ccl3P10855 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.71□□□□□ -0.54
Ccl3P10855 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Ccl3P10855 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl3P10855 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl3P10855 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC11.7□□□□□ -0.54
Ccl3P10855 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl3P10855 AC113441.2-201ENSMUST00000221538 1468 ntBASIC11.7□□□□□ -0.54
Ccl3P10855 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Ccl3P10855 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl3P10855 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl3P10855 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.7□□□□□ -0.54
Ccl3P10855 Gm45779-201ENSMUST00000212189 4064 ntBASIC11.7□□□□□ -0.54
Ccl3P10855 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl3P10855 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl3P10855 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl3P10855 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl3P10855 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl3P10855 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl3P10855 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl3P10855 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl3P10855 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl3P10855 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.7□□□□□ -0.54
Ccl3P10855 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.7□□□□□ -0.54
Ccl3P10855 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl3P10855 Gm14726-201ENSMUST00000120623 896 ntBASIC11.7□□□□□ -0.54
Ccl3P10855 Gm12715-201ENSMUST00000121430 1128 ntBASIC11.7□□□□□ -0.54
Ccl3P10855 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl3P10855 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.7□□□□□ -0.54
Ccl3P10855 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC11.7□□□□□ -0.54
Ccl3P10855 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.7□□□□□ -0.54
Ccl3P10855 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC11.7□□□□□ -0.54
Ccl3P10855 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Ccl3P10855 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl3P10855 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.7□□□□□ -0.54
Ccl3P10855 Gm30285-201ENSMUST00000214614 422 ntBASIC11.7□□□□□ -0.54
Ccl3P10855 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl3P10855 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl3P10855 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl3P10855 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl3P10855 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl3P10855 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl3P10855 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl3P10855 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl3P10855 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC11.7□□□□□ -0.54
Ccl3P10855 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.7□□□□□ -0.54
Ccl3P10855 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl3P10855 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl3P10855 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl3P10855 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl3P10855 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC11.69□□□□□ -0.54
Ccl3P10855 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccl3P10855 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ccl3P10855 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ccl3P10855 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Ccl3P10855 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms