Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Smim1P0C8K7 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Smim1P0C8K7 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Smim1P0C8K7 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Smim1P0C8K7 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Smim1P0C8K7 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Smim1P0C8K7 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Smim1P0C8K7 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Smim1P0C8K7 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Smim1P0C8K7 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC9.12□□□□□ -0.95
Smim1P0C8K7 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC9.12□□□□□ -0.95
Smim1P0C8K7 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Smim1P0C8K7 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC9.12□□□□□ -0.95
Smim1P0C8K7 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Smim1P0C8K7 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Smim1P0C8K7 Gm43273-201ENSMUST00000199649 2594 ntBASIC9.12□□□□□ -0.95
Smim1P0C8K7 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Smim1P0C8K7 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Smim1P0C8K7 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Smim1P0C8K7 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC9.11□□□□□ -0.95
Smim1P0C8K7 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smim1P0C8K7 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smim1P0C8K7 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smim1P0C8K7 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smim1P0C8K7 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smim1P0C8K7 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Smim1P0C8K7 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Smim1P0C8K7 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smim1P0C8K7 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smim1P0C8K7 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC9.11□□□□□ -0.95
Smim1P0C8K7 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smim1P0C8K7 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smim1P0C8K7 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Smim1P0C8K7 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Smim1P0C8K7 Gm5053-201ENSMUST00000208361 1678 ntBASIC9.11□□□□□ -0.95
Smim1P0C8K7 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smim1P0C8K7 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Smim1P0C8K7 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Smim1P0C8K7 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smim1P0C8K7 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smim1P0C8K7 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Smim1P0C8K7 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC9.11□□□□□ -0.95
Smim1P0C8K7 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Smim1P0C8K7 Gm4535-201ENSMUST00000182274 558 ntBASIC9.11□□□□□ -0.95
Smim1P0C8K7 Gm45841-201ENSMUST00000207700 164 ntBASIC9.11□□□□□ -0.95
Smim1P0C8K7 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC9.11□□□□□ -0.95
Smim1P0C8K7 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Smim1P0C8K7 Gm18934-201ENSMUST00000216671 1044 ntBASIC9.11□□□□□ -0.95
Smim1P0C8K7 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC9.11□□□□□ -0.95
Smim1P0C8K7 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC9.11□□□□□ -0.95
Smim1P0C8K7 AC154757.1-201ENSMUST00000228289 336 ntBASIC9.11□□□□□ -0.95
Smim1P0C8K7 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smim1P0C8K7 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smim1P0C8K7 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smim1P0C8K7 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Smim1P0C8K7 Gm10355-201ENSMUST00000097146 517 ntBASIC9.11□□□□□ -0.95
Smim1P0C8K7 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smim1P0C8K7 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Smim1P0C8K7 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smim1P0C8K7 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smim1P0C8K7 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smim1P0C8K7 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smim1P0C8K7 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smim1P0C8K7 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smim1P0C8K7 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smim1P0C8K7 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smim1P0C8K7 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Smim1P0C8K7 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC9.11□□□□□ -0.95
Smim1P0C8K7 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC9.11□□□□□ -0.95
Smim1P0C8K7 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smim1P0C8K7 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smim1P0C8K7 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Smim1P0C8K7 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smim1P0C8K7 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smim1P0C8K7 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC9.11□□□□□ -0.95
Smim1P0C8K7 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Smim1P0C8K7 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC9.11□□□□□ -0.95
Smim1P0C8K7 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Smim1P0C8K7 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smim1P0C8K7 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smim1P0C8K7 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smim1P0C8K7 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smim1P0C8K7 Gm43721-201ENSMUST00000199677 2313 ntBASIC9.1□□□□□ -0.95
Smim1P0C8K7 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smim1P0C8K7 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smim1P0C8K7 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smim1P0C8K7 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Smim1P0C8K7 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smim1P0C8K7 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smim1P0C8K7 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Smim1P0C8K7 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smim1P0C8K7 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smim1P0C8K7 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC9.1□□□□□ -0.95
Smim1P0C8K7 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smim1P0C8K7 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smim1P0C8K7 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Smim1P0C8K7 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Smim1P0C8K7 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Smim1P0C8K7 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Smim1P0C8K7 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC9.1□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms