Protein–RNA interactions for Protein: P04213

T-cell receptor beta chain V region C5 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04213 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04213 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04213 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
P04213 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
P04213 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
P04213 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
P04213 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.79□□□□□ -0.36
P04213 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
P04213 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04213 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04213 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
P04213 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04213 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04213 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
P04213 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
P04213 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
P04213 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04213 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
P04213 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.78□□□□□ -0.36
P04213 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.78□□□□□ -0.36
P04213 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
P04213 Gm44855-201ENSMUST00000205725 362 ntBASIC12.78□□□□□ -0.36
P04213 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.78□□□□□ -0.36
P04213 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.78□□□□□ -0.36
P04213 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04213 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04213 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC12.78□□□□□ -0.36
P04213 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.78□□□□□ -0.36
P04213 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04213 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04213 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04213 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
P04213 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04213 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04213 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
P04213 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04213 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
P04213 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
P04213 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
P04213 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
P04213 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
P04213 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
P04213 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
P04213 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
P04213 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
P04213 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
P04213 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
P04213 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
P04213 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
P04213 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.77□□□□□ -0.37
P04213 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
P04213 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.77□□□□□ -0.37
P04213 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.77□□□□□ -0.37
P04213 Gm5354-201ENSMUST00000182417 973 ntBASIC12.77□□□□□ -0.37
P04213 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
P04213 Gm38144-201ENSMUST00000192790 465 ntBASIC12.77□□□□□ -0.37
P04213 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
P04213 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.77□□□□□ -0.37
P04213 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.77□□□□□ -0.37
P04213 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
P04213 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
P04213 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
P04213 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
P04213 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
P04213 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
P04213 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.77□□□□□ -0.37
P04213 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
P04213 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
P04213 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
P04213 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
P04213 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
P04213 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
P04213 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
P04213 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
P04213 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
P04213 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
P04213 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
P04213 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
P04213 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
P04213 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P04213 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P04213 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
P04213 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.76□□□□□ -0.37
P04213 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
P04213 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.76□□□□□ -0.37
P04213 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
P04213 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P04213 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P04213 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P04213 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
P04213 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P04213 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
P04213 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
P04213 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
P04213 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.76□□□□□ -0.37
P04213 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.76□□□□□ -0.37
P04213 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.76□□□□□ -0.37
P04213 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.76□□□□□ -0.37
P04213 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.76□□□□□ -0.37
P04213 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms