Protein–RNA interactions for Protein: P01788

Ig heavy chain V region H8, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01788 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
P01788 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
P01788 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
P01788 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
P01788 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
P01788 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC10.53□□□□□ -0.72
P01788 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
P01788 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC10.53□□□□□ -0.72
P01788 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
P01788 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
P01788 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC10.53□□□□□ -0.72
P01788 Gm4804-201ENSMUST00000182234 999 ntBASIC10.53□□□□□ -0.72
P01788 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC10.53□□□□□ -0.72
P01788 Gm10766-202ENSMUST00000194123 606 ntBASIC10.53□□□□□ -0.72
P01788 CT943659.1-201ENSMUST00000215459 326 ntBASIC10.53□□□□□ -0.72
P01788 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
P01788 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
P01788 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
P01788 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
P01788 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
P01788 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
P01788 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
P01788 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
P01788 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
P01788 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
P01788 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
P01788 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
P01788 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
P01788 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
P01788 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
P01788 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
P01788 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
P01788 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
P01788 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
P01788 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.72
P01788 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC10.52□□□□□ -0.72
P01788 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
P01788 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
P01788 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.72
P01788 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
P01788 Gm13859-201ENSMUST00000119936 1423 ntBASIC10.52□□□□□ -0.73
P01788 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P01788 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P01788 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P01788 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
P01788 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC10.52□□□□□ -0.73
P01788 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC10.52□□□□□ -0.73
P01788 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
P01788 Mir449b-201ENSMUST00000104833 80 ntBASIC10.52□□□□□ -0.73
P01788 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC10.52□□□□□ -0.73
P01788 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
P01788 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P01788 Gm15770-201ENSMUST00000117498 584 ntBASIC10.52□□□□□ -0.73
P01788 Gm15693-201ENSMUST00000120470 637 ntBASIC10.52□□□□□ -0.73
P01788 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC10.52□□□□□ -0.73
P01788 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC10.52□□□□□ -0.73
P01788 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC10.52□□□□□ -0.73
P01788 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
P01788 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P01788 Gm38294-201ENSMUST00000192831 381 ntBASIC10.52□□□□□ -0.73
P01788 AC140397.2-201ENSMUST00000224213 834 ntBASIC10.52□□□□□ -0.73
P01788 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P01788 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
P01788 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
P01788 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
P01788 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
P01788 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC10.52□□□□□ -0.73
P01788 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P01788 AC151895.1-201ENSMUST00000219025 1742 ntBASIC10.52□□□□□ -0.73
P01788 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P01788 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC10.52□□□□□ -0.73
P01788 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P01788 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
P01788 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
P01788 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P01788 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC10.52□□□□□ -0.73
P01788 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
P01788 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
P01788 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P01788 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P01788 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P01788 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
P01788 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
P01788 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P01788 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
P01788 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P01788 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC10.51□□□□□ -0.73
P01788 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
P01788 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC10.51□□□□□ -0.73
P01788 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P01788 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC10.51□□□□□ -0.73
P01788 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
P01788 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC10.51□□□□□ -0.73
P01788 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC10.51□□□□□ -0.73
P01788 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
P01788 Gm24420-201ENSMUST00000176676 59 ntBASIC10.51□□□□□ -0.73
P01788 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
P01788 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC10.51□□□□□ -0.73
P01788 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC10.51□□□□□ -0.73
P01788 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms