Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Vti1aO89116 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.37□□□□□ -0.11
Vti1aO89116 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC14.37□□□□□ -0.11
Vti1aO89116 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC14.37□□□□□ -0.11
Vti1aO89116 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC14.37□□□□□ -0.11
Vti1aO89116 AC154171.1-201ENSMUST00000224610 643 ntBASIC14.37□□□□□ -0.11
Vti1aO89116 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Vti1aO89116 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Vti1aO89116 Gm24447-201ENSMUST00000083977 338 ntBASIC14.37□□□□□ -0.11
Vti1aO89116 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Vti1aO89116 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vti1aO89116 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vti1aO89116 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vti1aO89116 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vti1aO89116 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vti1aO89116 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vti1aO89116 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Vti1aO89116 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Vti1aO89116 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vti1aO89116 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vti1aO89116 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vti1aO89116 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vti1aO89116 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vti1aO89116 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vti1aO89116 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vti1aO89116 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vti1aO89116 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vti1aO89116 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vti1aO89116 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vti1aO89116 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vti1aO89116 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vti1aO89116 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Vti1aO89116 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vti1aO89116 Mir1247-201ENSMUST00000116706 82 ntBASIC14.36□□□□□ -0.11
Vti1aO89116 Gm15198-201ENSMUST00000117283 177 ntBASIC14.36□□□□□ -0.11
Vti1aO89116 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Vti1aO89116 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC14.36□□□□□ -0.11
Vti1aO89116 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC14.36□□□□□ -0.11
Vti1aO89116 Gm45880-201ENSMUST00000213041 853 ntBASIC14.36□□□□□ -0.11
Vti1aO89116 Itm2b-204ENSMUST00000228637 783 ntBASIC14.36□□□□□ -0.11
Vti1aO89116 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vti1aO89116 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Vti1aO89116 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vti1aO89116 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vti1aO89116 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vti1aO89116 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC14.36□□□□□ -0.11
Vti1aO89116 Gm13730-201ENSMUST00000121036 1462 ntBASIC14.36□□□□□ -0.11
Vti1aO89116 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vti1aO89116 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vti1aO89116 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vti1aO89116 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vti1aO89116 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vti1aO89116 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vti1aO89116 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Vti1aO89116 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vti1aO89116 Gm18222-201ENSMUST00000202416 1387 ntBASIC14.35□□□□□ -0.11
Vti1aO89116 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vti1aO89116 Gm8337-201ENSMUST00000187358 1938 ntBASIC14.35□□□□□ -0.11
Vti1aO89116 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vti1aO89116 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vti1aO89116 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.35□□□□□ -0.11
Vti1aO89116 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Vti1aO89116 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vti1aO89116 Gm5187-201ENSMUST00000117317 991 ntBASIC14.35□□□□□ -0.11
Vti1aO89116 Gm15770-201ENSMUST00000117498 584 ntBASIC14.35□□□□□ -0.11
Vti1aO89116 Gm16177-201ENSMUST00000120728 718 ntBASIC14.35□□□□□ -0.11
Vti1aO89116 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Vti1aO89116 Gm43179-201ENSMUST00000198797 275 ntBASIC14.35□□□□□ -0.11
Vti1aO89116 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC14.35□□□□□ -0.11
Vti1aO89116 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC14.35□□□□□ -0.11
Vti1aO89116 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vti1aO89116 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vti1aO89116 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Vti1aO89116 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.35□□□□□ -0.11
Vti1aO89116 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC14.35□□□□□ -0.11
Vti1aO89116 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Vti1aO89116 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vti1aO89116 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vti1aO89116 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vti1aO89116 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Vti1aO89116 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Vti1aO89116 AC168058.1-201ENSMUST00000219521 2282 ntBASIC14.35□□□□□ -0.11
Vti1aO89116 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vti1aO89116 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vti1aO89116 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vti1aO89116 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vti1aO89116 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Vti1aO89116 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.35□□□□□ -0.11
Vti1aO89116 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vti1aO89116 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.34□□□□□ -0.11
Vti1aO89116 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vti1aO89116 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vti1aO89116 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vti1aO89116 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vti1aO89116 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vti1aO89116 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vti1aO89116 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Vti1aO89116 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Vti1aO89116 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC14.34□□□□□ -0.11
Vti1aO89116 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms