Protein–RNA interactions for Protein: O89029

Matn4, Matrilin-4, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn4O89029 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Matn4O89029 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Matn4O89029 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Matn4O89029 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Matn4O89029 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Matn4O89029 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.59□□□□□ -0.39
Matn4O89029 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Matn4O89029 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Matn4O89029 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Matn4O89029 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Matn4O89029 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.59□□□□□ -0.39
Matn4O89029 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.59□□□□□ -0.39
Matn4O89029 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Matn4O89029 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.59□□□□□ -0.39
Matn4O89029 Gm27618-201ENSMUST00000183671 60 ntBASIC12.59□□□□□ -0.39
Matn4O89029 Gm19931-201ENSMUST00000198920 368 ntBASIC12.59□□□□□ -0.39
Matn4O89029 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Matn4O89029 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Matn4O89029 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.59□□□□□ -0.39
Matn4O89029 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.59□□□□□ -0.39
Matn4O89029 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.59□□□□□ -0.39
Matn4O89029 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.59□□□□□ -0.39
Matn4O89029 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Matn4O89029 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Matn4O89029 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Matn4O89029 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Matn4O89029 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Matn4O89029 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Matn4O89029 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Matn4O89029 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Matn4O89029 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Matn4O89029 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Matn4O89029 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Matn4O89029 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Matn4O89029 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Matn4O89029 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Matn4O89029 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.59□□□□□ -0.39
Matn4O89029 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Matn4O89029 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Matn4O89029 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Matn4O89029 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Matn4O89029 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Matn4O89029 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Matn4O89029 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Matn4O89029 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Matn4O89029 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.58□□□□□ -0.4
Matn4O89029 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Matn4O89029 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Matn4O89029 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.58□□□□□ -0.4
Matn4O89029 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.58□□□□□ -0.4
Matn4O89029 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Matn4O89029 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Matn4O89029 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Matn4O89029 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Matn4O89029 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Matn4O89029 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.58□□□□□ -0.4
Matn4O89029 Gm11594-201ENSMUST00000122313 162 ntBASIC12.58□□□□□ -0.4
Matn4O89029 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.58□□□□□ -0.4
Matn4O89029 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC12.58□□□□□ -0.4
Matn4O89029 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Matn4O89029 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.58□□□□□ -0.4
Matn4O89029 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.58□□□□□ -0.4
Matn4O89029 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Matn4O89029 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Matn4O89029 Gm38294-201ENSMUST00000192831 381 ntBASIC12.58□□□□□ -0.4
Matn4O89029 AC151286.1-201ENSMUST00000198489 145 ntBASIC12.58□□□□□ -0.4
Matn4O89029 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.58□□□□□ -0.4
Matn4O89029 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC12.58□□□□□ -0.4
Matn4O89029 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.58□□□□□ -0.4
Matn4O89029 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Matn4O89029 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.58□□□□□ -0.4
Matn4O89029 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.58□□□□□ -0.4
Matn4O89029 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Matn4O89029 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Matn4O89029 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Matn4O89029 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Matn4O89029 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Matn4O89029 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Matn4O89029 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.58□□□□□ -0.4
Matn4O89029 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Matn4O89029 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Matn4O89029 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Matn4O89029 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Matn4O89029 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Matn4O89029 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Matn4O89029 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.58□□□□□ -0.4
Matn4O89029 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Matn4O89029 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Matn4O89029 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
Matn4O89029 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Matn4O89029 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Matn4O89029 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Matn4O89029 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Matn4O89029 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Matn4O89029 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Matn4O89029 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Matn4O89029 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Matn4O89029 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Matn4O89029 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Matn4O89029 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms