Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
ClppO88696 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ClppO88696 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ClppO88696 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.08□□□□□ -0.32
ClppO88696 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
ClppO88696 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ClppO88696 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ClppO88696 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ClppO88696 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ClppO88696 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ClppO88696 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.08□□□□□ -0.32
ClppO88696 Gm15429-201ENSMUST00000151268 798 ntBASIC13.08□□□□□ -0.32
ClppO88696 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.08□□□□□ -0.32
ClppO88696 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
ClppO88696 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ClppO88696 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ClppO88696 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
ClppO88696 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
ClppO88696 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC13.08□□□□□ -0.32
ClppO88696 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ClppO88696 Nudt18-202ENSMUST00000228554 3619 ntBASIC13.08□□□□□ -0.32
ClppO88696 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ClppO88696 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
ClppO88696 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.08□□□□□ -0.32
ClppO88696 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ClppO88696 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.08□□□□□ -0.32
ClppO88696 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ClppO88696 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.08□□□□□ -0.32
ClppO88696 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
ClppO88696 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ClppO88696 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
ClppO88696 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ClppO88696 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.07□□□□□ -0.32
ClppO88696 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ClppO88696 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ClppO88696 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ClppO88696 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ClppO88696 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ClppO88696 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ClppO88696 Mir698-201ENSMUST00000102164 109 ntBASIC13.07□□□□□ -0.32
ClppO88696 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ClppO88696 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.07□□□□□ -0.32
ClppO88696 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ClppO88696 Gm27486-201ENSMUST00000184923 80 ntBASIC13.07□□□□□ -0.32
ClppO88696 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ClppO88696 Gm2495-201ENSMUST00000191160 466 ntBASIC13.07□□□□□ -0.32
ClppO88696 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ClppO88696 Gm8463-201ENSMUST00000208573 613 ntBASIC13.07□□□□□ -0.32
ClppO88696 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.07□□□□□ -0.32
ClppO88696 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC13.07□□□□□ -0.32
ClppO88696 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ClppO88696 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ClppO88696 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC13.07□□□□□ -0.32
ClppO88696 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
ClppO88696 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ClppO88696 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
ClppO88696 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ClppO88696 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.07□□□□□ -0.32
ClppO88696 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.07□□□□□ -0.32
ClppO88696 AC114008.2-201ENSMUST00000227699 1347 ntBASIC13.07□□□□□ -0.32
ClppO88696 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ClppO88696 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.07□□□□□ -0.32
ClppO88696 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
ClppO88696 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ClppO88696 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
ClppO88696 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.06□□□□□ -0.32
ClppO88696 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ClppO88696 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.06□□□□□ -0.32
ClppO88696 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
ClppO88696 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
ClppO88696 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ClppO88696 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ClppO88696 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
ClppO88696 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ClppO88696 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ClppO88696 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
ClppO88696 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ClppO88696 Gm11814-201ENSMUST00000119515 929 ntBASIC13.06□□□□□ -0.32
ClppO88696 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.06□□□□□ -0.32
ClppO88696 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ClppO88696 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.06□□□□□ -0.32
ClppO88696 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ClppO88696 Gm29741-201ENSMUST00000192667 421 ntBASIC13.06□□□□□ -0.32
ClppO88696 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC13.06□□□□□ -0.32
ClppO88696 Gm7287-201ENSMUST00000205267 602 ntBASIC13.06□□□□□ -0.32
ClppO88696 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
ClppO88696 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.06□□□□□ -0.32
ClppO88696 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ClppO88696 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ClppO88696 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ClppO88696 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
ClppO88696 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
ClppO88696 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ClppO88696 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
ClppO88696 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
ClppO88696 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ClppO88696 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
ClppO88696 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.05□□□□□ -0.32
ClppO88696 Gm9816-201ENSMUST00000122292 1414 ntBASIC13.05□□□□□ -0.32
ClppO88696 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms