Protein–RNA interactions for Protein: O88508

Dnmt3a, DNA (cytosine-5)-methyltransferase 3A, mousemouse

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3aO88508 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Dnmt3aO88508 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Dnmt3aO88508 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Dnmt3aO88508 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Dnmt3aO88508 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Dnmt3aO88508 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Dnmt3aO88508 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.44□□□□□ -0.26
Dnmt3aO88508 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.44□□□□□ -0.26
Dnmt3aO88508 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Dnmt3aO88508 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.44□□□□□ -0.26
Dnmt3aO88508 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.44□□□□□ -0.26
Dnmt3aO88508 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC13.44□□□□□ -0.26
Dnmt3aO88508 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Dnmt3aO88508 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.44□□□□□ -0.26
Dnmt3aO88508 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Dnmt3aO88508 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.44□□□□□ -0.26
Dnmt3aO88508 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.44□□□□□ -0.26
Dnmt3aO88508 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Dnmt3aO88508 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Dnmt3aO88508 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Dnmt3aO88508 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Dnmt3aO88508 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Dnmt3aO88508 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
Dnmt3aO88508 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Dnmt3aO88508 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Dnmt3aO88508 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Dnmt3aO88508 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Dnmt3aO88508 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Dnmt3aO88508 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Dnmt3aO88508 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Dnmt3aO88508 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.44□□□□□ -0.26
Dnmt3aO88508 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Dnmt3aO88508 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Dnmt3aO88508 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Dnmt3aO88508 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Dnmt3aO88508 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Dnmt3aO88508 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Dnmt3aO88508 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Dnmt3aO88508 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Dnmt3aO88508 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Dnmt3aO88508 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Dnmt3aO88508 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Dnmt3aO88508 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Dnmt3aO88508 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Dnmt3aO88508 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Dnmt3aO88508 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Dnmt3aO88508 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.43□□□□□ -0.26
Dnmt3aO88508 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Dnmt3aO88508 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13.43□□□□□ -0.26
Dnmt3aO88508 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.43□□□□□ -0.26
Dnmt3aO88508 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Dnmt3aO88508 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Dnmt3aO88508 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Dnmt3aO88508 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.43□□□□□ -0.26
Dnmt3aO88508 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Dnmt3aO88508 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Dnmt3aO88508 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.43□□□□□ -0.26
Dnmt3aO88508 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Dnmt3aO88508 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Dnmt3aO88508 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Dnmt3aO88508 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Dnmt3aO88508 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Dnmt3aO88508 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Dnmt3aO88508 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Dnmt3aO88508 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Dnmt3aO88508 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Dnmt3aO88508 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Dnmt3aO88508 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Dnmt3aO88508 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Dnmt3aO88508 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Dnmt3aO88508 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Dnmt3aO88508 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Dnmt3aO88508 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Dnmt3aO88508 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Dnmt3aO88508 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Dnmt3aO88508 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Dnmt3aO88508 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Dnmt3aO88508 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Dnmt3aO88508 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Dnmt3aO88508 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Dnmt3aO88508 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Dnmt3aO88508 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Dnmt3aO88508 Gm15678-201ENSMUST00000117573 960 ntBASIC13.42□□□□□ -0.26
Dnmt3aO88508 Gm12490-201ENSMUST00000120255 560 ntBASIC13.42□□□□□ -0.26
Dnmt3aO88508 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.42□□□□□ -0.26
Dnmt3aO88508 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.42□□□□□ -0.26
Dnmt3aO88508 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.42□□□□□ -0.26
Dnmt3aO88508 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Dnmt3aO88508 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC13.42□□□□□ -0.26
Dnmt3aO88508 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Dnmt3aO88508 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.42□□□□□ -0.26
Dnmt3aO88508 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Dnmt3aO88508 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Dnmt3aO88508 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Dnmt3aO88508 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Dnmt3aO88508 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Dnmt3aO88508 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Dnmt3aO88508 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Dnmt3aO88508 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Dnmt3aO88508 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms