Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vti1bO88384 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vti1bO88384 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vti1bO88384 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vti1bO88384 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vti1bO88384 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vti1bO88384 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.73□□□□□ -0.37
Vti1bO88384 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vti1bO88384 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vti1bO88384 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.73□□□□□ -0.37
Vti1bO88384 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.73□□□□□ -0.37
Vti1bO88384 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vti1bO88384 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vti1bO88384 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vti1bO88384 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vti1bO88384 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vti1bO88384 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Vti1bO88384 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vti1bO88384 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vti1bO88384 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.73□□□□□ -0.37
Vti1bO88384 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Vti1bO88384 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC12.73□□□□□ -0.37
Vti1bO88384 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vti1bO88384 Gm4804-201ENSMUST00000182234 999 ntBASIC12.73□□□□□ -0.37
Vti1bO88384 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Vti1bO88384 Gm10766-202ENSMUST00000194123 606 ntBASIC12.73□□□□□ -0.37
Vti1bO88384 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vti1bO88384 Gm44719-201ENSMUST00000206404 149 ntBASIC12.73□□□□□ -0.37
Vti1bO88384 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.73□□□□□ -0.37
Vti1bO88384 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vti1bO88384 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vti1bO88384 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vti1bO88384 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vti1bO88384 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vti1bO88384 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Vti1bO88384 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vti1bO88384 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Vti1bO88384 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vti1bO88384 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vti1bO88384 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vti1bO88384 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vti1bO88384 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vti1bO88384 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vti1bO88384 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vti1bO88384 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vti1bO88384 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vti1bO88384 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Vti1bO88384 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vti1bO88384 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vti1bO88384 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vti1bO88384 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vti1bO88384 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vti1bO88384 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.72□□□□□ -0.37
Vti1bO88384 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vti1bO88384 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC12.72□□□□□ -0.37
Vti1bO88384 Gm15487-201ENSMUST00000122373 465 ntBASIC12.72□□□□□ -0.37
Vti1bO88384 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vti1bO88384 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Vti1bO88384 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.72□□□□□ -0.37
Vti1bO88384 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.72□□□□□ -0.37
Vti1bO88384 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vti1bO88384 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vti1bO88384 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vti1bO88384 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vti1bO88384 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Vti1bO88384 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vti1bO88384 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.72□□□□□ -0.37
Vti1bO88384 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Vti1bO88384 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Vti1bO88384 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vti1bO88384 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vti1bO88384 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vti1bO88384 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vti1bO88384 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Vti1bO88384 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Vti1bO88384 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.71□□□□□ -0.37
Vti1bO88384 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vti1bO88384 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
Vti1bO88384 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC12.71□□□□□ -0.37
Vti1bO88384 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vti1bO88384 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vti1bO88384 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Vti1bO88384 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vti1bO88384 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vti1bO88384 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vti1bO88384 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.71□□□□□ -0.37
Vti1bO88384 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vti1bO88384 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vti1bO88384 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vti1bO88384 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.71□□□□□ -0.37
Vti1bO88384 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.71□□□□□ -0.37
Vti1bO88384 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vti1bO88384 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vti1bO88384 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Vti1bO88384 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Vti1bO88384 Gm27838-201ENSMUST00000184829 128 ntBASIC12.71□□□□□ -0.37
Vti1bO88384 Gm29741-201ENSMUST00000192667 421 ntBASIC12.71□□□□□ -0.37
Vti1bO88384 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC12.71□□□□□ -0.37
Vti1bO88384 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vti1bO88384 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms