Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm2O35900 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Lsm2O35900 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC11.86□□□□□ -0.51
Lsm2O35900 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm2O35900 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm2O35900 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Lsm2O35900 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Lsm2O35900 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm2O35900 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm2O35900 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm2O35900 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm2O35900 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm2O35900 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm2O35900 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm2O35900 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm2O35900 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm2O35900 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm2O35900 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm2O35900 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm2O35900 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm2O35900 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC11.85□□□□□ -0.51
Lsm2O35900 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm2O35900 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm2O35900 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.85□□□□□ -0.51
Lsm2O35900 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC11.85□□□□□ -0.51
Lsm2O35900 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm2O35900 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC11.85□□□□□ -0.51
Lsm2O35900 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC11.85□□□□□ -0.51
Lsm2O35900 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC11.85□□□□□ -0.51
Lsm2O35900 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC11.85□□□□□ -0.51
Lsm2O35900 AC131710.1-201ENSMUST00000228336 990 ntBASIC11.85□□□□□ -0.51
Lsm2O35900 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm2O35900 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Lsm2O35900 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm2O35900 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.85□□□□□ -0.51
Lsm2O35900 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm2O35900 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm2O35900 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm2O35900 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm2O35900 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm2O35900 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC11.85□□□□□ -0.51
Lsm2O35900 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm2O35900 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm2O35900 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Lsm2O35900 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Lsm2O35900 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm2O35900 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm2O35900 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm2O35900 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm2O35900 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC11.85□□□□□ -0.51
Lsm2O35900 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm2O35900 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lsm2O35900 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm2O35900 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
Lsm2O35900 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm2O35900 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Lsm2O35900 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.84□□□□□ -0.51
Lsm2O35900 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.84□□□□□ -0.51
Lsm2O35900 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm2O35900 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC11.84□□□□□ -0.51
Lsm2O35900 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Lsm2O35900 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Lsm2O35900 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm2O35900 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm2O35900 Gm25287-201ENSMUST00000103846 110 ntBASIC11.84□□□□□ -0.51
Lsm2O35900 Gm22918-201ENSMUST00000103855 110 ntBASIC11.84□□□□□ -0.51
Lsm2O35900 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC11.84□□□□□ -0.51
Lsm2O35900 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm2O35900 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Lsm2O35900 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm2O35900 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm2O35900 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC11.84□□□□□ -0.51
Lsm2O35900 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm2O35900 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Lsm2O35900 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Lsm2O35900 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm2O35900 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Lsm2O35900 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm2O35900 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm2O35900 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC11.84□□□□□ -0.51
Lsm2O35900 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm2O35900 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm2O35900 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm2O35900 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm2O35900 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Lsm2O35900 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm2O35900 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm2O35900 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm2O35900 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm2O35900 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm2O35900 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC11.84□□□□□ -0.51
Lsm2O35900 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm2O35900 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm2O35900 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lsm2O35900 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Lsm2O35900 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.83□□□□□ -0.51
Lsm2O35900 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm2O35900 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm2O35900 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lsm2O35900 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 142.1 ms