Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Alx4O35137 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Alx4O35137 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Alx4O35137 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Alx4O35137 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Alx4O35137 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Alx4O35137 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Alx4O35137 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Alx4O35137 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Alx4O35137 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Alx4O35137 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Alx4O35137 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Alx4O35137 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Alx4O35137 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC11.9□□□□□ -0.5
Alx4O35137 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Alx4O35137 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Alx4O35137 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC11.9□□□□□ -0.5
Alx4O35137 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC11.9□□□□□ -0.5
Alx4O35137 Gm5779-201ENSMUST00000218467 910 ntBASIC11.9□□□□□ -0.5
Alx4O35137 AC140397.2-201ENSMUST00000224213 834 ntBASIC11.9□□□□□ -0.5
Alx4O35137 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Alx4O35137 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Alx4O35137 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Alx4O35137 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Alx4O35137 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Alx4O35137 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Alx4O35137 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Alx4O35137 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Alx4O35137 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Alx4O35137 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Alx4O35137 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Alx4O35137 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Alx4O35137 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Alx4O35137 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Alx4O35137 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Alx4O35137 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Alx4O35137 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Alx4O35137 Gm5320-201ENSMUST00000207163 1519 ntBASIC11.9□□□□□ -0.5
Alx4O35137 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
Alx4O35137 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Alx4O35137 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Alx4O35137 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Alx4O35137 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Alx4O35137 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Alx4O35137 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Alx4O35137 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Alx4O35137 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Alx4O35137 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Alx4O35137 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Alx4O35137 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Alx4O35137 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Alx4O35137 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Alx4O35137 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Alx4O35137 Gm11594-201ENSMUST00000122313 162 ntBASIC11.89□□□□□ -0.51
Alx4O35137 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC11.89□□□□□ -0.51
Alx4O35137 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC11.89□□□□□ -0.51
Alx4O35137 Gm25948-201ENSMUST00000175334 112 ntBASIC11.89□□□□□ -0.51
Alx4O35137 Gm3436-201ENSMUST00000179930 840 ntBASIC11.89□□□□□ -0.51
Alx4O35137 Gm8000-201ENSMUST00000188378 592 ntBASIC11.89□□□□□ -0.51
Alx4O35137 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Alx4O35137 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC11.89□□□□□ -0.51
Alx4O35137 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Alx4O35137 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Alx4O35137 Gm24447-201ENSMUST00000083977 338 ntBASIC11.89□□□□□ -0.51
Alx4O35137 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Alx4O35137 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.89□□□□□ -0.51
Alx4O35137 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.89□□□□□ -0.51
Alx4O35137 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Alx4O35137 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Alx4O35137 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Alx4O35137 AC161252.3-201ENSMUST00000225465 1549 ntBASIC11.89□□□□□ -0.51
Alx4O35137 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Alx4O35137 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Alx4O35137 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Alx4O35137 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Alx4O35137 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.89□□□□□ -0.51
Alx4O35137 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Alx4O35137 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Alx4O35137 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Alx4O35137 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Alx4O35137 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Alx4O35137 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Alx4O35137 AC154747.3-201ENSMUST00000224471 3470 ntBASIC11.88□□□□□ -0.51
Alx4O35137 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Alx4O35137 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Alx4O35137 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC11.88□□□□□ -0.51
Alx4O35137 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC11.88□□□□□ -0.51
Alx4O35137 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Alx4O35137 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.88□□□□□ -0.51
Alx4O35137 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Alx4O35137 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Alx4O35137 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Alx4O35137 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Alx4O35137 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Alx4O35137 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Alx4O35137 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC11.88□□□□□ -0.51
Alx4O35137 Gm37015-201ENSMUST00000192763 1521 ntBASIC11.88□□□□□ -0.51
Alx4O35137 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
Alx4O35137 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Alx4O35137 Gm8410-201ENSMUST00000117225 605 ntBASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms