Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ebf3O08791 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Ebf3O08791 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ebf3O08791 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.86□□□□□ -0.19
Ebf3O08791 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.86□□□□□ -0.19
Ebf3O08791 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC13.86□□□□□ -0.19
Ebf3O08791 Gm10156-201ENSMUST00000122364 462 ntBASIC13.86□□□□□ -0.19
Ebf3O08791 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC13.86□□□□□ -0.19
Ebf3O08791 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Ebf3O08791 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC13.86□□□□□ -0.19
Ebf3O08791 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ebf3O08791 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ebf3O08791 Gm29608-201ENSMUST00000190444 463 ntBASIC13.86□□□□□ -0.19
Ebf3O08791 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ebf3O08791 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.86□□□□□ -0.19
Ebf3O08791 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13.86□□□□□ -0.19
Ebf3O08791 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ebf3O08791 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ebf3O08791 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.86□□□□□ -0.19
Ebf3O08791 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.86□□□□□ -0.19
Ebf3O08791 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ebf3O08791 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ebf3O08791 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ebf3O08791 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
Ebf3O08791 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.86□□□□□ -0.19
Ebf3O08791 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ebf3O08791 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.86□□□□□ -0.19
Ebf3O08791 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ebf3O08791 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ebf3O08791 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ebf3O08791 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ebf3O08791 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Ebf3O08791 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ebf3O08791 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Ebf3O08791 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.85□□□□□ -0.19
Ebf3O08791 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ebf3O08791 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Ebf3O08791 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ebf3O08791 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ebf3O08791 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Ebf3O08791 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ebf3O08791 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ebf3O08791 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ebf3O08791 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ebf3O08791 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ebf3O08791 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Ebf3O08791 Gm8213-201ENSMUST00000118191 441 ntBASIC13.85□□□□□ -0.19
Ebf3O08791 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.85□□□□□ -0.19
Ebf3O08791 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC13.85□□□□□ -0.19
Ebf3O08791 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ebf3O08791 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC13.85□□□□□ -0.19
Ebf3O08791 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ebf3O08791 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC13.85□□□□□ -0.19
Ebf3O08791 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC13.85□□□□□ -0.19
Ebf3O08791 Gm45880-201ENSMUST00000213041 853 ntBASIC13.85□□□□□ -0.19
Ebf3O08791 AC154171.1-201ENSMUST00000224610 643 ntBASIC13.85□□□□□ -0.19
Ebf3O08791 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ebf3O08791 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ebf3O08791 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ebf3O08791 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ebf3O08791 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ebf3O08791 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ebf3O08791 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ebf3O08791 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ebf3O08791 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ebf3O08791 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ebf3O08791 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ebf3O08791 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.85□□□□□ -0.19
Ebf3O08791 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Ebf3O08791 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Ebf3O08791 Gm12846-201ENSMUST00000120431 1373 ntBASIC13.84□□□□□ -0.19
Ebf3O08791 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf3O08791 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf3O08791 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.84□□□□□ -0.19
Ebf3O08791 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.84□□□□□ -0.19
Ebf3O08791 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf3O08791 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf3O08791 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.84□□□□□ -0.19
Ebf3O08791 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf3O08791 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf3O08791 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.84□□□□□ -0.19
Ebf3O08791 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC13.84□□□□□ -0.19
Ebf3O08791 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf3O08791 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf3O08791 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf3O08791 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf3O08791 Gm15770-201ENSMUST00000117498 584 ntBASIC13.84□□□□□ -0.19
Ebf3O08791 Gm12203-201ENSMUST00000118235 598 ntBASIC13.84□□□□□ -0.19
Ebf3O08791 Gm5687-201ENSMUST00000118252 640 ntBASIC13.84□□□□□ -0.19
Ebf3O08791 Gm12209-201ENSMUST00000120089 596 ntBASIC13.84□□□□□ -0.19
Ebf3O08791 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf3O08791 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf3O08791 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.84□□□□□ -0.19
Ebf3O08791 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf3O08791 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf3O08791 CU024892.2-201ENSMUST00000224608 832 ntBASIC13.84□□□□□ -0.19
Ebf3O08791 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf3O08791 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf3O08791 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Ebf3O08791 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms