Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Shisa8J3QNX5 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shisa8J3QNX5 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shisa8J3QNX5 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shisa8J3QNX5 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.15□□□□□ -0.46
Shisa8J3QNX5 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shisa8J3QNX5 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shisa8J3QNX5 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shisa8J3QNX5 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Shisa8J3QNX5 Pck2-205ENSMUST00000226352 2784 ntBASIC12.15□□□□□ -0.46
Shisa8J3QNX5 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shisa8J3QNX5 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shisa8J3QNX5 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shisa8J3QNX5 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Shisa8J3QNX5 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shisa8J3QNX5 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shisa8J3QNX5 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Shisa8J3QNX5 Matn2-203ENSMUST00000226766 3252 ntBASIC12.15□□□□□ -0.46
Shisa8J3QNX5 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Shisa8J3QNX5 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Shisa8J3QNX5 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Shisa8J3QNX5 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC12.14□□□□□ -0.47
Shisa8J3QNX5 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shisa8J3QNX5 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shisa8J3QNX5 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shisa8J3QNX5 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shisa8J3QNX5 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shisa8J3QNX5 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shisa8J3QNX5 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shisa8J3QNX5 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shisa8J3QNX5 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Shisa8J3QNX5 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.14□□□□□ -0.47
Shisa8J3QNX5 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shisa8J3QNX5 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shisa8J3QNX5 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shisa8J3QNX5 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shisa8J3QNX5 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Shisa8J3QNX5 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shisa8J3QNX5 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shisa8J3QNX5 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shisa8J3QNX5 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shisa8J3QNX5 Gm4995-201ENSMUST00000117247 432 ntBASIC12.14□□□□□ -0.47
Shisa8J3QNX5 Gm25911-201ENSMUST00000157621 56 ntBASIC12.14□□□□□ -0.47
Shisa8J3QNX5 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.14□□□□□ -0.47
Shisa8J3QNX5 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC12.14□□□□□ -0.47
Shisa8J3QNX5 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC12.14□□□□□ -0.47
Shisa8J3QNX5 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Shisa8J3QNX5 Gm21470-201ENSMUST00000187680 696 ntBASIC12.14□□□□□ -0.47
Shisa8J3QNX5 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC12.14□□□□□ -0.47
Shisa8J3QNX5 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Shisa8J3QNX5 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.14□□□□□ -0.47
Shisa8J3QNX5 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shisa8J3QNX5 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shisa8J3QNX5 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC12.14□□□□□ -0.47
Shisa8J3QNX5 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shisa8J3QNX5 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shisa8J3QNX5 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shisa8J3QNX5 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Shisa8J3QNX5 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Shisa8J3QNX5 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.14□□□□□ -0.47
Shisa8J3QNX5 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shisa8J3QNX5 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shisa8J3QNX5 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Shisa8J3QNX5 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Shisa8J3QNX5 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shisa8J3QNX5 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shisa8J3QNX5 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Shisa8J3QNX5 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shisa8J3QNX5 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shisa8J3QNX5 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.13□□□□□ -0.47
Shisa8J3QNX5 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shisa8J3QNX5 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Shisa8J3QNX5 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shisa8J3QNX5 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shisa8J3QNX5 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.13□□□□□ -0.47
Shisa8J3QNX5 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.13□□□□□ -0.47
Shisa8J3QNX5 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shisa8J3QNX5 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Shisa8J3QNX5 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.13□□□□□ -0.47
Shisa8J3QNX5 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Shisa8J3QNX5 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.13□□□□□ -0.47
Shisa8J3QNX5 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shisa8J3QNX5 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shisa8J3QNX5 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Shisa8J3QNX5 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shisa8J3QNX5 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shisa8J3QNX5 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
Shisa8J3QNX5 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shisa8J3QNX5 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Shisa8J3QNX5 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shisa8J3QNX5 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC12.13□□□□□ -0.47
Shisa8J3QNX5 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.13□□□□□ -0.47
Shisa8J3QNX5 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC12.13□□□□□ -0.47
Shisa8J3QNX5 Gm27494-201ENSMUST00000184735 189 ntBASIC12.13□□□□□ -0.47
Shisa8J3QNX5 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Shisa8J3QNX5 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC12.13□□□□□ -0.47
Shisa8J3QNX5 Gm43125-201ENSMUST00000201724 730 ntBASIC12.13□□□□□ -0.47
Shisa8J3QNX5 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC12.13□□□□□ -0.47
Shisa8J3QNX5 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC12.13□□□□□ -0.47
Shisa8J3QNX5 AC124549.3-201ENSMUST00000225541 367 ntBASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms