Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb9E9Q5G2 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC15.66■□□□□ 0.1
Pcdhb9E9Q5G2 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb9E9Q5G2 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb9E9Q5G2 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb9E9Q5G2 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb9E9Q5G2 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC15.66■□□□□ 0.1
Pcdhb9E9Q5G2 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC15.66■□□□□ 0.1
Pcdhb9E9Q5G2 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb9E9Q5G2 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb9E9Q5G2 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb9E9Q5G2 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb9E9Q5G2 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Pcdhb9E9Q5G2 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Pcdhb9E9Q5G2 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb9E9Q5G2 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb9E9Q5G2 Gm43423-201ENSMUST00000198390 2094 ntBASIC15.65■□□□□ 0.1
Pcdhb9E9Q5G2 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb9E9Q5G2 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
Pcdhb9E9Q5G2 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC15.65■□□□□ 0.1
Pcdhb9E9Q5G2 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC15.65■□□□□ 0.1
Pcdhb9E9Q5G2 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC15.65■□□□□ 0.1
Pcdhb9E9Q5G2 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb9E9Q5G2 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC15.65■□□□□ 0.1
Pcdhb9E9Q5G2 Gm40466-201ENSMUST00000212174 422 ntBASIC15.65■□□□□ 0.1
Pcdhb9E9Q5G2 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC15.65■□□□□ 0.1
Pcdhb9E9Q5G2 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb9E9Q5G2 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Pcdhb9E9Q5G2 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb9E9Q5G2 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC15.65■□□□□ 0.1
Pcdhb9E9Q5G2 Gm7553-201ENSMUST00000185805 1426 ntBASIC15.65■□□□□ 0.1
Pcdhb9E9Q5G2 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb9E9Q5G2 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Pcdhb9E9Q5G2 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb9E9Q5G2 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Pcdhb9E9Q5G2 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb9E9Q5G2 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb9E9Q5G2 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb9E9Q5G2 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb9E9Q5G2 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
Pcdhb9E9Q5G2 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb9E9Q5G2 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb9E9Q5G2 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb9E9Q5G2 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb9E9Q5G2 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC15.64■□□□□ 0.09
Pcdhb9E9Q5G2 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb9E9Q5G2 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb9E9Q5G2 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb9E9Q5G2 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Pcdhb9E9Q5G2 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb9E9Q5G2 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Pcdhb9E9Q5G2 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC15.64■□□□□ 0.09
Pcdhb9E9Q5G2 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Pcdhb9E9Q5G2 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb9E9Q5G2 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Pcdhb9E9Q5G2 Gm9924-202ENSMUST00000192760 2311 ntBASIC15.64■□□□□ 0.09
Pcdhb9E9Q5G2 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC15.64■□□□□ 0.09
Pcdhb9E9Q5G2 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC15.64■□□□□ 0.09
Pcdhb9E9Q5G2 AC135669.1-202ENSMUST00000216742 540 ntBASIC15.64■□□□□ 0.09
Pcdhb9E9Q5G2 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb9E9Q5G2 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Pcdhb9E9Q5G2 Gm10146-201ENSMUST00000072739 309 ntBASIC15.64■□□□□ 0.09
Pcdhb9E9Q5G2 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Pcdhb9E9Q5G2 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb9E9Q5G2 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb9E9Q5G2 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb9E9Q5G2 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb9E9Q5G2 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb9E9Q5G2 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb9E9Q5G2 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb9E9Q5G2 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Pcdhb9E9Q5G2 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
Pcdhb9E9Q5G2 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb9E9Q5G2 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb9E9Q5G2 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb9E9Q5G2 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb9E9Q5G2 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb9E9Q5G2 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb9E9Q5G2 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb9E9Q5G2 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb9E9Q5G2 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb9E9Q5G2 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb9E9Q5G2 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
Pcdhb9E9Q5G2 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb9E9Q5G2 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb9E9Q5G2 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb9E9Q5G2 Gm12384-201ENSMUST00000119228 919 ntBASIC15.63■□□□□ 0.09
Pcdhb9E9Q5G2 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb9E9Q5G2 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC15.63■□□□□ 0.09
Pcdhb9E9Q5G2 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC15.63■□□□□ 0.09
Pcdhb9E9Q5G2 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC15.63■□□□□ 0.09
Pcdhb9E9Q5G2 AC154276.1-201ENSMUST00000228874 1299 ntBASIC15.63■□□□□ 0.09
Pcdhb9E9Q5G2 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb9E9Q5G2 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb9E9Q5G2 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb9E9Q5G2 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb9E9Q5G2 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb9E9Q5G2 Gm38577-201ENSMUST00000221531 4545 ntBASIC15.63■□□□□ 0.09
Pcdhb9E9Q5G2 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdhb9E9Q5G2 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms