Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Hfm1D3Z4R1 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hfm1D3Z4R1 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Hfm1D3Z4R1 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
Hfm1D3Z4R1 Gm13408-201ENSMUST00000119822 798 ntBASIC18.39■□□□□ 0.53
Hfm1D3Z4R1 Gm13935-201ENSMUST00000121859 798 ntBASIC18.39■□□□□ 0.53
Hfm1D3Z4R1 Gm12208-201ENSMUST00000122004 163 ntBASIC18.39■□□□□ 0.53
Hfm1D3Z4R1 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC18.39■□□□□ 0.53
Hfm1D3Z4R1 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hfm1D3Z4R1 Gm16296-201ENSMUST00000159905 325 ntBASIC18.39■□□□□ 0.53
Hfm1D3Z4R1 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC18.39■□□□□ 0.53
Hfm1D3Z4R1 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Hfm1D3Z4R1 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
Hfm1D3Z4R1 Gm6652-201ENSMUST00000186414 1070 ntBASIC18.39■□□□□ 0.53
Hfm1D3Z4R1 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC18.39■□□□□ 0.53
Hfm1D3Z4R1 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Hfm1D3Z4R1 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Hfm1D3Z4R1 Gm5466-201ENSMUST00000119395 1890 ntBASIC18.39■□□□□ 0.53
Hfm1D3Z4R1 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hfm1D3Z4R1 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Hfm1D3Z4R1 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC18.39■□□□□ 0.53
Hfm1D3Z4R1 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hfm1D3Z4R1 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hfm1D3Z4R1 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hfm1D3Z4R1 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Hfm1D3Z4R1 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hfm1D3Z4R1 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hfm1D3Z4R1 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC18.38■□□□□ 0.53
Hfm1D3Z4R1 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hfm1D3Z4R1 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Hfm1D3Z4R1 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hfm1D3Z4R1 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC18.38■□□□□ 0.53
Hfm1D3Z4R1 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hfm1D3Z4R1 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hfm1D3Z4R1 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hfm1D3Z4R1 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC18.38■□□□□ 0.53
Hfm1D3Z4R1 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC18.38■□□□□ 0.53
Hfm1D3Z4R1 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Hfm1D3Z4R1 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hfm1D3Z4R1 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
Hfm1D3Z4R1 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Hfm1D3Z4R1 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Hfm1D3Z4R1 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hfm1D3Z4R1 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Hfm1D3Z4R1 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hfm1D3Z4R1 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Hfm1D3Z4R1 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hfm1D3Z4R1 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Hfm1D3Z4R1 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hfm1D3Z4R1 Gm13611-201ENSMUST00000118269 318 ntBASIC18.37■□□□□ 0.53
Hfm1D3Z4R1 Gm12380-201ENSMUST00000119012 544 ntBASIC18.37■□□□□ 0.53
Hfm1D3Z4R1 Gm13045-201ENSMUST00000119019 712 ntBASIC18.37■□□□□ 0.53
Hfm1D3Z4R1 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC18.37■□□□□ 0.53
Hfm1D3Z4R1 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC18.37■□□□□ 0.53
Hfm1D3Z4R1 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC18.37■□□□□ 0.53
Hfm1D3Z4R1 AC166344.1-202ENSMUST00000224139 234 ntBASIC18.37■□□□□ 0.53
Hfm1D3Z4R1 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hfm1D3Z4R1 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hfm1D3Z4R1 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Hfm1D3Z4R1 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hfm1D3Z4R1 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hfm1D3Z4R1 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Hfm1D3Z4R1 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC18.37■□□□□ 0.53
Hfm1D3Z4R1 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hfm1D3Z4R1 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Hfm1D3Z4R1 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hfm1D3Z4R1 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hfm1D3Z4R1 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hfm1D3Z4R1 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hfm1D3Z4R1 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Hfm1D3Z4R1 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hfm1D3Z4R1 Gm37133-201ENSMUST00000192705 1922 ntBASIC18.37■□□□□ 0.53
Hfm1D3Z4R1 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Hfm1D3Z4R1 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Hfm1D3Z4R1 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Hfm1D3Z4R1 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Hfm1D3Z4R1 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hfm1D3Z4R1 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Hfm1D3Z4R1 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC18.36■□□□□ 0.53
Hfm1D3Z4R1 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Hfm1D3Z4R1 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hfm1D3Z4R1 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hfm1D3Z4R1 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Hfm1D3Z4R1 Gm11628-201ENSMUST00000117568 171 ntBASIC18.36■□□□□ 0.53
Hfm1D3Z4R1 Gm8566-201ENSMUST00000120174 465 ntBASIC18.36■□□□□ 0.53
Hfm1D3Z4R1 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hfm1D3Z4R1 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Hfm1D3Z4R1 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hfm1D3Z4R1 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC18.36■□□□□ 0.53
Hfm1D3Z4R1 Gm44551-201ENSMUST00000208804 171 ntBASIC18.36■□□□□ 0.53
Hfm1D3Z4R1 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC18.36■□□□□ 0.53
Hfm1D3Z4R1 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Hfm1D3Z4R1 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Hfm1D3Z4R1 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Hfm1D3Z4R1 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hfm1D3Z4R1 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Hfm1D3Z4R1 AC122197.2-201ENSMUST00000219196 1635 ntBASIC18.36■□□□□ 0.53
Hfm1D3Z4R1 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hfm1D3Z4R1 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hfm1D3Z4R1 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms