Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC13.43□□□□□ -0.26
Col4a6B1AVK5 Gm23699-201ENSMUST00000158835 135 ntBASIC13.43□□□□□ -0.26
Col4a6B1AVK5 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Col4a6B1AVK5 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC13.43□□□□□ -0.26
Col4a6B1AVK5 Gm19187-201ENSMUST00000206781 892 ntBASIC13.43□□□□□ -0.26
Col4a6B1AVK5 Gm8285-201ENSMUST00000208293 759 ntBASIC13.43□□□□□ -0.26
Col4a6B1AVK5 AC163667.3-201ENSMUST00000225774 222 ntBASIC13.43□□□□□ -0.26
Col4a6B1AVK5 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col4a6B1AVK5 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col4a6B1AVK5 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col4a6B1AVK5 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Col4a6B1AVK5 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC13.43□□□□□ -0.26
Col4a6B1AVK5 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col4a6B1AVK5 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col4a6B1AVK5 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col4a6B1AVK5 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col4a6B1AVK5 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col4a6B1AVK5 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col4a6B1AVK5 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col4a6B1AVK5 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Col4a6B1AVK5 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col4a6B1AVK5 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col4a6B1AVK5 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col4a6B1AVK5 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col4a6B1AVK5 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col4a6B1AVK5 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Col4a6B1AVK5 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col4a6B1AVK5 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.42□□□□□ -0.26
Col4a6B1AVK5 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
Col4a6B1AVK5 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.42□□□□□ -0.26
Col4a6B1AVK5 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col4a6B1AVK5 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col4a6B1AVK5 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Col4a6B1AVK5 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC13.42□□□□□ -0.26
Col4a6B1AVK5 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC13.42□□□□□ -0.26
Col4a6B1AVK5 Gm12015-201ENSMUST00000117065 843 ntBASIC13.42□□□□□ -0.26
Col4a6B1AVK5 Gm17040-202ENSMUST00000170597 889 ntBASIC13.42□□□□□ -0.26
Col4a6B1AVK5 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col4a6B1AVK5 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC13.42□□□□□ -0.26
Col4a6B1AVK5 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC13.42□□□□□ -0.26
Col4a6B1AVK5 Gm44651-201ENSMUST00000207343 372 ntBASIC13.42□□□□□ -0.26
Col4a6B1AVK5 Gm45433-201ENSMUST00000209386 247 ntBASIC13.42□□□□□ -0.26
Col4a6B1AVK5 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col4a6B1AVK5 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col4a6B1AVK5 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col4a6B1AVK5 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Col4a6B1AVK5 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Col4a6B1AVK5 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col4a6B1AVK5 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Col4a6B1AVK5 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col4a6B1AVK5 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col4a6B1AVK5 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Col4a6B1AVK5 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col4a6B1AVK5 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col4a6B1AVK5 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col4a6B1AVK5 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col4a6B1AVK5 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.42□□□□□ -0.26
Col4a6B1AVK5 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col4a6B1AVK5 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Col4a6B1AVK5 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
Col4a6B1AVK5 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col4a6B1AVK5 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC13.41□□□□□ -0.26
Col4a6B1AVK5 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col4a6B1AVK5 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.41□□□□□ -0.26
Col4a6B1AVK5 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col4a6B1AVK5 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC13.41□□□□□ -0.26
Col4a6B1AVK5 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC13.41□□□□□ -0.26
Col4a6B1AVK5 Gm14921-201ENSMUST00000118643 908 ntBASIC13.41□□□□□ -0.26
Col4a6B1AVK5 Gm12286-201ENSMUST00000119246 1002 ntBASIC13.41□□□□□ -0.26
Col4a6B1AVK5 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col4a6B1AVK5 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC13.41□□□□□ -0.26
Col4a6B1AVK5 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col4a6B1AVK5 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col4a6B1AVK5 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC13.41□□□□□ -0.26
Col4a6B1AVK5 Gm7848-201ENSMUST00000210739 718 ntBASIC13.41□□□□□ -0.26
Col4a6B1AVK5 Gm7207-201ENSMUST00000211575 1067 ntBASIC13.41□□□□□ -0.26
Col4a6B1AVK5 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC13.41□□□□□ -0.26
Col4a6B1AVK5 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col4a6B1AVK5 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col4a6B1AVK5 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Col4a6B1AVK5 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col4a6B1AVK5 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col4a6B1AVK5 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col4a6B1AVK5 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col4a6B1AVK5 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC13.41□□□□□ -0.26
Col4a6B1AVK5 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC13.41□□□□□ -0.26
Col4a6B1AVK5 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col4a6B1AVK5 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC13.41□□□□□ -0.26
Col4a6B1AVK5 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col4a6B1AVK5 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col4a6B1AVK5 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col4a6B1AVK5 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col4a6B1AVK5 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col4a6B1AVK5 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.41□□□□□ -0.26
Col4a6B1AVK5 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col4a6B1AVK5 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.41□□□□□ -0.26
Col4a6B1AVK5 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Col4a6B1AVK5 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col4a6B1AVK5 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col4a6B1AVK5 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms