Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Gm44608-201ENSMUST00000206827 855 ntBASIC11.82□□□□□ -0.52
Gm11127A7VMS2 CT030704.2-201ENSMUST00000228887 494 ntBASIC11.82□□□□□ -0.52
Gm11127A7VMS2 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm11127A7VMS2 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm11127A7VMS2 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm11127A7VMS2 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Gm11127A7VMS2 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm11127A7VMS2 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Gm11127A7VMS2 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm11127A7VMS2 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Gm11127A7VMS2 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Gm11127A7VMS2 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Gm11127A7VMS2 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.82□□□□□ -0.52
Gm11127A7VMS2 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Gm11127A7VMS2 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm11127A7VMS2 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm11127A7VMS2 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Gm11127A7VMS2 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm11127A7VMS2 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Gm11127A7VMS2 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm11127A7VMS2 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Gm11127A7VMS2 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm11127A7VMS2 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm11127A7VMS2 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm11127A7VMS2 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm11127A7VMS2 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Gm11127A7VMS2 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm11127A7VMS2 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm11127A7VMS2 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm11127A7VMS2 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm11127A7VMS2 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Gm11127A7VMS2 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC11.81□□□□□ -0.52
Gm11127A7VMS2 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Gm11127A7VMS2 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC11.81□□□□□ -0.52
Gm11127A7VMS2 Gm9719-201ENSMUST00000162765 543 ntBASIC11.81□□□□□ -0.52
Gm11127A7VMS2 Gm29541-201ENSMUST00000191351 678 ntBASIC11.81□□□□□ -0.52
Gm11127A7VMS2 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Gm11127A7VMS2 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC11.81□□□□□ -0.52
Gm11127A7VMS2 AC132104.2-201ENSMUST00000215011 266 ntBASIC11.81□□□□□ -0.52
Gm11127A7VMS2 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
Gm11127A7VMS2 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Gm11127A7VMS2 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Gm11127A7VMS2 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm11127A7VMS2 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Gm11127A7VMS2 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Gm11127A7VMS2 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm11127A7VMS2 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm11127A7VMS2 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Gm11127A7VMS2 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm11127A7VMS2 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm11127A7VMS2 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Gm11127A7VMS2 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm11127A7VMS2 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Gm11127A7VMS2 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm11127A7VMS2 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Gm11127A7VMS2 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.81□□□□□ -0.52
Gm11127A7VMS2 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm11127A7VMS2 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Gm11127A7VMS2 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.81□□□□□ -0.52
Gm11127A7VMS2 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.8□□□□□ -0.52
Gm11127A7VMS2 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Gm11127A7VMS2 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm11127A7VMS2 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm11127A7VMS2 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.8□□□□□ -0.52
Gm11127A7VMS2 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm11127A7VMS2 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Gm11127A7VMS2 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm11127A7VMS2 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Gm11127A7VMS2 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Gm11127A7VMS2 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm11127A7VMS2 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm11127A7VMS2 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm11127A7VMS2 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Gm11127A7VMS2 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm11127A7VMS2 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Gm11127A7VMS2 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm11127A7VMS2 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Gm11127A7VMS2 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm11127A7VMS2 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Gm11127A7VMS2 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC11.8□□□□□ -0.52
Gm11127A7VMS2 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Gm11127A7VMS2 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Gm11127A7VMS2 Gm5779-201ENSMUST00000218467 910 ntBASIC11.8□□□□□ -0.52
Gm11127A7VMS2 AC090659.2-201ENSMUST00000225378 1186 ntBASIC11.8□□□□□ -0.52
Gm11127A7VMS2 AC139350.3-201ENSMUST00000226151 420 ntBASIC11.8□□□□□ -0.52
Gm11127A7VMS2 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Gm11127A7VMS2 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm11127A7VMS2 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm11127A7VMS2 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Gm11127A7VMS2 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Gm11127A7VMS2 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm11127A7VMS2 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Gm11127A7VMS2 Gm8775-201ENSMUST00000170943 1327 ntBASIC11.8□□□□□ -0.52
Gm11127A7VMS2 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm11127A7VMS2 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm11127A7VMS2 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Gm11127A7VMS2 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Gm11127A7VMS2 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Gm11127A7VMS2 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.8□□□□□ -0.52
Gm11127A7VMS2 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms