Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a4A2AX52 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a4A2AX52 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a4A2AX52 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a4A2AX52 Gm12715-201ENSMUST00000121430 1128 ntBASIC11.24□□□□□ -0.61
Col6a4A2AX52 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a4A2AX52 Mir6927-201ENSMUST00000184494 71 ntBASIC11.24□□□□□ -0.61
Col6a4A2AX52 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC11.24□□□□□ -0.61
Col6a4A2AX52 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.24□□□□□ -0.61
Col6a4A2AX52 AC131997.1-201ENSMUST00000228611 1229 ntBASIC11.24□□□□□ -0.61
Col6a4A2AX52 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a4A2AX52 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a4A2AX52 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Col6a4A2AX52 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a4A2AX52 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a4A2AX52 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a4A2AX52 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Col6a4A2AX52 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a4A2AX52 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Col6a4A2AX52 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC11.24□□□□□ -0.61
Col6a4A2AX52 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Col6a4A2AX52 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a4A2AX52 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a4A2AX52 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a4A2AX52 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a4A2AX52 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a4A2AX52 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a4A2AX52 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a4A2AX52 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a4A2AX52 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Col6a4A2AX52 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a4A2AX52 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a4A2AX52 Gm30285-201ENSMUST00000214614 422 ntBASIC11.23□□□□□ -0.61
Col6a4A2AX52 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a4A2AX52 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Col6a4A2AX52 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a4A2AX52 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Col6a4A2AX52 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a4A2AX52 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a4A2AX52 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a4A2AX52 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a4A2AX52 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a4A2AX52 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a4A2AX52 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a4A2AX52 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a4A2AX52 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a4A2AX52 Gm42918-201ENSMUST00000199249 1580 ntBASIC11.23□□□□□ -0.61
Col6a4A2AX52 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a4A2AX52 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC11.23□□□□□ -0.61
Col6a4A2AX52 Mir698-201ENSMUST00000102164 109 ntBASIC11.23□□□□□ -0.61
Col6a4A2AX52 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a4A2AX52 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC11.23□□□□□ -0.61
Col6a4A2AX52 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a4A2AX52 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a4A2AX52 Gm5869-201ENSMUST00000200248 1257 ntBASIC11.23□□□□□ -0.61
Col6a4A2AX52 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
Col6a4A2AX52 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a4A2AX52 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a4A2AX52 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC11.23□□□□□ -0.61
Col6a4A2AX52 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a4A2AX52 Gm43509-201ENSMUST00000196551 2594 ntBASIC11.23□□□□□ -0.61
Col6a4A2AX52 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Col6a4A2AX52 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a4A2AX52 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a4A2AX52 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a4A2AX52 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC11.22□□□□□ -0.61
Col6a4A2AX52 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a4A2AX52 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Col6a4A2AX52 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a4A2AX52 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
Col6a4A2AX52 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC11.22□□□□□ -0.61
Col6a4A2AX52 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a4A2AX52 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
Col6a4A2AX52 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a4A2AX52 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a4A2AX52 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a4A2AX52 Gm45760-201ENSMUST00000212190 1782 ntBASIC11.22□□□□□ -0.61
Col6a4A2AX52 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Col6a4A2AX52 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a4A2AX52 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a4A2AX52 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a4A2AX52 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a4A2AX52 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a4A2AX52 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Col6a4A2AX52 Gm12217-201ENSMUST00000118858 696 ntBASIC11.22□□□□□ -0.61
Col6a4A2AX52 Gm14726-201ENSMUST00000120623 896 ntBASIC11.22□□□□□ -0.61
Col6a4A2AX52 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC11.22□□□□□ -0.61
Col6a4A2AX52 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC11.22□□□□□ -0.61
Col6a4A2AX52 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a4A2AX52 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a4A2AX52 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a4A2AX52 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a4A2AX52 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.22□□□□□ -0.61
Col6a4A2AX52 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a4A2AX52 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a4A2AX52 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a4A2AX52 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a4A2AX52 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a4A2AX52 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col6a4A2AX52 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms