Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav6n-6A0A075B6B2 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC9.97□□□□□ -0.81
Trav6n-6A0A075B6B2 Gm10275-201ENSMUST00000092620 635 ntBASIC9.97□□□□□ -0.81
Trav6n-6A0A075B6B2 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
Trav6n-6A0A075B6B2 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC9.97□□□□□ -0.81
Trav6n-6A0A075B6B2 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC9.97□□□□□ -0.81
Trav6n-6A0A075B6B2 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC9.97□□□□□ -0.81
Trav6n-6A0A075B6B2 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Trav6n-6A0A075B6B2 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav6n-6A0A075B6B2 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav6n-6A0A075B6B2 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav6n-6A0A075B6B2 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav6n-6A0A075B6B2 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav6n-6A0A075B6B2 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Trav6n-6A0A075B6B2 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav6n-6A0A075B6B2 AC154725.1-201ENSMUST00000224826 1961 ntBASIC9.97□□□□□ -0.81
Trav6n-6A0A075B6B2 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav6n-6A0A075B6B2 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav6n-6A0A075B6B2 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav6n-6A0A075B6B2 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav6n-6A0A075B6B2 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav6n-6A0A075B6B2 Gm5763-201ENSMUST00000155951 1530 ntBASIC9.97□□□□□ -0.81
Trav6n-6A0A075B6B2 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav6n-6A0A075B6B2 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav6n-6A0A075B6B2 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Trav6n-6A0A075B6B2 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC9.96□□□□□ -0.81
Trav6n-6A0A075B6B2 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav6n-6A0A075B6B2 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav6n-6A0A075B6B2 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav6n-6A0A075B6B2 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav6n-6A0A075B6B2 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav6n-6A0A075B6B2 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
Trav6n-6A0A075B6B2 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav6n-6A0A075B6B2 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC9.96□□□□□ -0.81
Trav6n-6A0A075B6B2 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav6n-6A0A075B6B2 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav6n-6A0A075B6B2 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav6n-6A0A075B6B2 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav6n-6A0A075B6B2 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Trav6n-6A0A075B6B2 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav6n-6A0A075B6B2 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav6n-6A0A075B6B2 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC9.96□□□□□ -0.82
Trav6n-6A0A075B6B2 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav6n-6A0A075B6B2 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav6n-6A0A075B6B2 Gm6222-201ENSMUST00000120787 396 ntBASIC9.96□□□□□ -0.82
Trav6n-6A0A075B6B2 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC9.96□□□□□ -0.82
Trav6n-6A0A075B6B2 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC9.96□□□□□ -0.82
Trav6n-6A0A075B6B2 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav6n-6A0A075B6B2 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav6n-6A0A075B6B2 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Trav6n-6A0A075B6B2 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav6n-6A0A075B6B2 Gm25144-201ENSMUST00000179561 110 ntBASIC9.96□□□□□ -0.82
Trav6n-6A0A075B6B2 Gm25352-201ENSMUST00000179815 110 ntBASIC9.96□□□□□ -0.82
Trav6n-6A0A075B6B2 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav6n-6A0A075B6B2 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Trav6n-6A0A075B6B2 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Trav6n-6A0A075B6B2 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav6n-6A0A075B6B2 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Trav6n-6A0A075B6B2 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav6n-6A0A075B6B2 Gm37014-201ENSMUST00000194723 2253 ntBASIC9.96□□□□□ -0.82
Trav6n-6A0A075B6B2 Gm45011-201ENSMUST00000207620 2297 ntBASIC9.96□□□□□ -0.82
Trav6n-6A0A075B6B2 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC9.96□□□□□ -0.82
Trav6n-6A0A075B6B2 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav6n-6A0A075B6B2 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC9.96□□□□□ -0.82
Trav6n-6A0A075B6B2 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav6n-6A0A075B6B2 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav6n-6A0A075B6B2 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Trav6n-6A0A075B6B2 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC9.96□□□□□ -0.82
Trav6n-6A0A075B6B2 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Trav6n-6A0A075B6B2 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Trav6n-6A0A075B6B2 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC9.96□□□□□ -0.82
Trav6n-6A0A075B6B2 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav6n-6A0A075B6B2 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav6n-6A0A075B6B2 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Trav6n-6A0A075B6B2 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav6n-6A0A075B6B2 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav6n-6A0A075B6B2 CT025678.1-201ENSMUST00000214795 2972 ntBASIC9.96□□□□□ -0.82
Trav6n-6A0A075B6B2 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Trav6n-6A0A075B6B2 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav6n-6A0A075B6B2 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Trav6n-6A0A075B6B2 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav6n-6A0A075B6B2 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Trav6n-6A0A075B6B2 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav6n-6A0A075B6B2 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Trav6n-6A0A075B6B2 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav6n-6A0A075B6B2 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav6n-6A0A075B6B2 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav6n-6A0A075B6B2 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav6n-6A0A075B6B2 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav6n-6A0A075B6B2 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC9.95□□□□□ -0.82
Trav6n-6A0A075B6B2 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav6n-6A0A075B6B2 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Trav6n-6A0A075B6B2 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC9.95□□□□□ -0.82
Trav6n-6A0A075B6B2 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Trav6n-6A0A075B6B2 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Trav6n-6A0A075B6B2 Gm6415-201ENSMUST00000118488 348 ntBASIC9.95□□□□□ -0.82
Trav6n-6A0A075B6B2 Gm15693-201ENSMUST00000120470 637 ntBASIC9.95□□□□□ -0.82
Trav6n-6A0A075B6B2 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav6n-6A0A075B6B2 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav6n-6A0A075B6B2 Gm22175-201ENSMUST00000175007 78 ntBASIC9.95□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms