Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav18A0A075B656 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC10.94□□□□□ -0.66
Trav18A0A075B656 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav18A0A075B656 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav18A0A075B656 Gm15459-201ENSMUST00000117405 1941 ntBASIC10.94□□□□□ -0.66
Trav18A0A075B656 Gm8355-201ENSMUST00000177767 1941 ntBASIC10.94□□□□□ -0.66
Trav18A0A075B656 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav18A0A075B656 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav18A0A075B656 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav18A0A075B656 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav18A0A075B656 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav18A0A075B656 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav18A0A075B656 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav18A0A075B656 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav18A0A075B656 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Trav18A0A075B656 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC10.94□□□□□ -0.66
Trav18A0A075B656 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav18A0A075B656 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav18A0A075B656 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav18A0A075B656 Gm13453-201ENSMUST00000118708 357 ntBASIC10.94□□□□□ -0.66
Trav18A0A075B656 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav18A0A075B656 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav18A0A075B656 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav18A0A075B656 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav18A0A075B656 Gm7775-201ENSMUST00000218871 853 ntBASIC10.94□□□□□ -0.66
Trav18A0A075B656 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav18A0A075B656 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav18A0A075B656 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav18A0A075B656 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav18A0A075B656 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav18A0A075B656 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav18A0A075B656 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav18A0A075B656 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Trav18A0A075B656 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav18A0A075B656 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav18A0A075B656 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC10.94□□□□□ -0.66
Trav18A0A075B656 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC10.94□□□□□ -0.66
Trav18A0A075B656 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC10.94□□□□□ -0.66
Trav18A0A075B656 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav18A0A075B656 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav18A0A075B656 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Trav18A0A075B656 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav18A0A075B656 AC153366.2-201ENSMUST00000219461 1984 ntBASIC10.94□□□□□ -0.66
Trav18A0A075B656 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav18A0A075B656 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav18A0A075B656 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav18A0A075B656 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav18A0A075B656 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav18A0A075B656 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav18A0A075B656 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav18A0A075B656 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Trav18A0A075B656 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav18A0A075B656 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav18A0A075B656 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav18A0A075B656 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Trav18A0A075B656 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav18A0A075B656 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav18A0A075B656 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav18A0A075B656 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav18A0A075B656 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Trav18A0A075B656 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav18A0A075B656 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav18A0A075B656 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav18A0A075B656 Gm44401-201ENSMUST00000204462 2375 ntBASIC10.93□□□□□ -0.66
Trav18A0A075B656 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav18A0A075B656 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC10.93□□□□□ -0.66
Trav18A0A075B656 Gm13616-201ENSMUST00000120600 222 ntBASIC10.93□□□□□ -0.66
Trav18A0A075B656 Gm14730-201ENSMUST00000122378 1045 ntBASIC10.93□□□□□ -0.66
Trav18A0A075B656 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav18A0A075B656 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC10.93□□□□□ -0.66
Trav18A0A075B656 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav18A0A075B656 Gm27772-201ENSMUST00000184900 187 ntBASIC10.93□□□□□ -0.66
Trav18A0A075B656 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Trav18A0A075B656 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav18A0A075B656 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav18A0A075B656 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC10.93□□□□□ -0.66
Trav18A0A075B656 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC10.93□□□□□ -0.66
Trav18A0A075B656 Gm7498-201ENSMUST00000203282 1084 ntBASIC10.93□□□□□ -0.66
Trav18A0A075B656 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC10.93□□□□□ -0.66
Trav18A0A075B656 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC10.93□□□□□ -0.66
Trav18A0A075B656 Gm9063-201ENSMUST00000223299 582 ntBASIC10.93□□□□□ -0.66
Trav18A0A075B656 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav18A0A075B656 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Trav18A0A075B656 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav18A0A075B656 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav18A0A075B656 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav18A0A075B656 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav18A0A075B656 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Trav18A0A075B656 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav18A0A075B656 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav18A0A075B656 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
Trav18A0A075B656 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav18A0A075B656 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav18A0A075B656 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav18A0A075B656 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Trav18A0A075B656 AC137842.1-201ENSMUST00000227896 2064 ntBASIC10.93□□□□□ -0.66
Trav18A0A075B656 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav18A0A075B656 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav18A0A075B656 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Trav18A0A075B656 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms