Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
H2afb2S4R1M3 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.36□□□□□ -0.27
H2afb2S4R1M3 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.36□□□□□ -0.27
H2afb2S4R1M3 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afb2S4R1M3 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.36□□□□□ -0.27
H2afb2S4R1M3 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afb2S4R1M3 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afb2S4R1M3 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afb2S4R1M3 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
H2afb2S4R1M3 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
H2afb2S4R1M3 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afb2S4R1M3 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
H2afb2S4R1M3 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
H2afb2S4R1M3 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
H2afb2S4R1M3 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
H2afb2S4R1M3 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
H2afb2S4R1M3 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
H2afb2S4R1M3 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
H2afb2S4R1M3 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
H2afb2S4R1M3 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afb2S4R1M3 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
H2afb2S4R1M3 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
H2afb2S4R1M3 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb2S4R1M3 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb2S4R1M3 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb2S4R1M3 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb2S4R1M3 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb2S4R1M3 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
H2afb2S4R1M3 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb2S4R1M3 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb2S4R1M3 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb2S4R1M3 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb2S4R1M3 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb2S4R1M3 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
H2afb2S4R1M3 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.35□□□□□ -0.27
H2afb2S4R1M3 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb2S4R1M3 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.35□□□□□ -0.27
H2afb2S4R1M3 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.35□□□□□ -0.27
H2afb2S4R1M3 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb2S4R1M3 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb2S4R1M3 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.35□□□□□ -0.27
H2afb2S4R1M3 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb2S4R1M3 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb2S4R1M3 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.35□□□□□ -0.27
H2afb2S4R1M3 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.35□□□□□ -0.27
H2afb2S4R1M3 Gm27437-201ENSMUST00000183429 107 ntBASIC13.35□□□□□ -0.27
H2afb2S4R1M3 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.35□□□□□ -0.27
H2afb2S4R1M3 Gm29608-201ENSMUST00000190444 463 ntBASIC13.35□□□□□ -0.27
H2afb2S4R1M3 Gm38223-201ENSMUST00000194484 695 ntBASIC13.35□□□□□ -0.27
H2afb2S4R1M3 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb2S4R1M3 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb2S4R1M3 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
H2afb2S4R1M3 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
H2afb2S4R1M3 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb2S4R1M3 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb2S4R1M3 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb2S4R1M3 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb2S4R1M3 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb2S4R1M3 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb2S4R1M3 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
H2afb2S4R1M3 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb2S4R1M3 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb2S4R1M3 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb2S4R1M3 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb2S4R1M3 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb2S4R1M3 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb2S4R1M3 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
H2afb2S4R1M3 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
H2afb2S4R1M3 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.34□□□□□ -0.27
H2afb2S4R1M3 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
H2afb2S4R1M3 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
H2afb2S4R1M3 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
H2afb2S4R1M3 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
H2afb2S4R1M3 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
H2afb2S4R1M3 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
H2afb2S4R1M3 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
H2afb2S4R1M3 Gm12341-201ENSMUST00000119724 503 ntBASIC13.34□□□□□ -0.27
H2afb2S4R1M3 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.34□□□□□ -0.27
H2afb2S4R1M3 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
H2afb2S4R1M3 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
H2afb2S4R1M3 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
H2afb2S4R1M3 Mir7221-201ENSMUST00000184009 72 ntBASIC13.34□□□□□ -0.27
H2afb2S4R1M3 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
H2afb2S4R1M3 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.34□□□□□ -0.27
H2afb2S4R1M3 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
H2afb2S4R1M3 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.34□□□□□ -0.27
H2afb2S4R1M3 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.34□□□□□ -0.27
H2afb2S4R1M3 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.34□□□□□ -0.27
H2afb2S4R1M3 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
H2afb2S4R1M3 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
H2afb2S4R1M3 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
H2afb2S4R1M3 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
H2afb2S4R1M3 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
H2afb2S4R1M3 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
H2afb2S4R1M3 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
H2afb2S4R1M3 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
H2afb2S4R1M3 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
H2afb2S4R1M3 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
H2afb2S4R1M3 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
H2afb2S4R1M3 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms