Protein–RNA interactions for Protein: S4R181

Ccdc166, Coiled-coil domain-containing 166, mousemouse

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc166S4R181 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc166S4R181 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.82□□□□□ -0.36
Ccdc166S4R181 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc166S4R181 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc166S4R181 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Ccdc166S4R181 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc166S4R181 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc166S4R181 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc166S4R181 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Ccdc166S4R181 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc166S4R181 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.81□□□□□ -0.36
Ccdc166S4R181 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc166S4R181 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc166S4R181 Gm21451-201ENSMUST00000111062 2775 ntBASIC12.81□□□□□ -0.36
Ccdc166S4R181 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.81□□□□□ -0.36
Ccdc166S4R181 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc166S4R181 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc166S4R181 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc166S4R181 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.81□□□□□ -0.36
Ccdc166S4R181 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc166S4R181 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc166S4R181 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc166S4R181 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc166S4R181 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc166S4R181 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc166S4R181 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc166S4R181 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ccdc166S4R181 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Ccdc166S4R181 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.81□□□□□ -0.36
Ccdc166S4R181 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc166S4R181 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.81□□□□□ -0.36
Ccdc166S4R181 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.81□□□□□ -0.36
Ccdc166S4R181 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.81□□□□□ -0.36
Ccdc166S4R181 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.81□□□□□ -0.36
Ccdc166S4R181 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc166S4R181 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.81□□□□□ -0.36
Ccdc166S4R181 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.81□□□□□ -0.36
Ccdc166S4R181 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.81□□□□□ -0.36
Ccdc166S4R181 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc166S4R181 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc166S4R181 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc166S4R181 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc166S4R181 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc166S4R181 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc166S4R181 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc166S4R181 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc166S4R181 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc166S4R181 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc166S4R181 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc166S4R181 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc166S4R181 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.81□□□□□ -0.36
Ccdc166S4R181 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc166S4R181 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.81□□□□□ -0.36
Ccdc166S4R181 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.8□□□□□ -0.36
Ccdc166S4R181 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc166S4R181 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc166S4R181 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc166S4R181 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc166S4R181 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc166S4R181 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc166S4R181 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc166S4R181 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ccdc166S4R181 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc166S4R181 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.8□□□□□ -0.36
Ccdc166S4R181 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc166S4R181 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc166S4R181 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc166S4R181 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.8□□□□□ -0.36
Ccdc166S4R181 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc166S4R181 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.8□□□□□ -0.36
Ccdc166S4R181 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc166S4R181 Gm27572-201ENSMUST00000183702 255 ntBASIC12.8□□□□□ -0.36
Ccdc166S4R181 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc166S4R181 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc166S4R181 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc166S4R181 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.8□□□□□ -0.36
Ccdc166S4R181 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ccdc166S4R181 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc166S4R181 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc166S4R181 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc166S4R181 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc166S4R181 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc166S4R181 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc166S4R181 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.8□□□□□ -0.36
Ccdc166S4R181 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc166S4R181 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc166S4R181 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc166S4R181 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc166S4R181 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Ccdc166S4R181 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc166S4R181 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc166S4R181 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc166S4R181 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.8□□□□□ -0.36
Ccdc166S4R181 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc166S4R181 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc166S4R181 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc166S4R181 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc166S4R181 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.8□□□□□ -0.36
Ccdc166S4R181 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.79□□□□□ -0.36
Ccdc166S4R181 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms