Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcb1Q9Z0H3 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC13.82□□□□□ -0.2
Smarcb1Q9Z0H3 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcb1Q9Z0H3 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC13.82□□□□□ -0.2
Smarcb1Q9Z0H3 Gm7029-201ENSMUST00000173226 450 ntBASIC13.82□□□□□ -0.2
Smarcb1Q9Z0H3 Gm28693-202ENSMUST00000190758 331 ntBASIC13.82□□□□□ -0.2
Smarcb1Q9Z0H3 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcb1Q9Z0H3 Gm45331-201ENSMUST00000209868 554 ntBASIC13.82□□□□□ -0.2
Smarcb1Q9Z0H3 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcb1Q9Z0H3 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcb1Q9Z0H3 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcb1Q9Z0H3 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcb1Q9Z0H3 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcb1Q9Z0H3 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcb1Q9Z0H3 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcb1Q9Z0H3 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcb1Q9Z0H3 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcb1Q9Z0H3 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcb1Q9Z0H3 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcb1Q9Z0H3 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcb1Q9Z0H3 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcb1Q9Z0H3 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcb1Q9Z0H3 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcb1Q9Z0H3 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.82□□□□□ -0.2
Smarcb1Q9Z0H3 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcb1Q9Z0H3 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcb1Q9Z0H3 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.82□□□□□ -0.2
Smarcb1Q9Z0H3 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Smarcb1Q9Z0H3 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcb1Q9Z0H3 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcb1Q9Z0H3 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.81□□□□□ -0.2
Smarcb1Q9Z0H3 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.81□□□□□ -0.2
Smarcb1Q9Z0H3 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
Smarcb1Q9Z0H3 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcb1Q9Z0H3 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.81□□□□□ -0.2
Smarcb1Q9Z0H3 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcb1Q9Z0H3 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.81□□□□□ -0.2
Smarcb1Q9Z0H3 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.81□□□□□ -0.2
Smarcb1Q9Z0H3 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcb1Q9Z0H3 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcb1Q9Z0H3 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC13.81□□□□□ -0.2
Smarcb1Q9Z0H3 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.81□□□□□ -0.2
Smarcb1Q9Z0H3 Gm11978-201ENSMUST00000122315 466 ntBASIC13.81□□□□□ -0.2
Smarcb1Q9Z0H3 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcb1Q9Z0H3 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcb1Q9Z0H3 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC13.81□□□□□ -0.2
Smarcb1Q9Z0H3 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Smarcb1Q9Z0H3 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.81□□□□□ -0.2
Smarcb1Q9Z0H3 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.81□□□□□ -0.2
Smarcb1Q9Z0H3 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC13.81□□□□□ -0.2
Smarcb1Q9Z0H3 Gm25927-201ENSMUST00000175058 117 ntBASIC13.81□□□□□ -0.2
Smarcb1Q9Z0H3 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Smarcb1Q9Z0H3 Gm27572-201ENSMUST00000183702 255 ntBASIC13.81□□□□□ -0.2
Smarcb1Q9Z0H3 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.81□□□□□ -0.2
Smarcb1Q9Z0H3 Gm4768-201ENSMUST00000206199 686 ntBASIC13.81□□□□□ -0.2
Smarcb1Q9Z0H3 Gm6007-201ENSMUST00000208170 823 ntBASIC13.81□□□□□ -0.2
Smarcb1Q9Z0H3 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcb1Q9Z0H3 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Smarcb1Q9Z0H3 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcb1Q9Z0H3 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcb1Q9Z0H3 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcb1Q9Z0H3 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcb1Q9Z0H3 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcb1Q9Z0H3 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcb1Q9Z0H3 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcb1Q9Z0H3 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcb1Q9Z0H3 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcb1Q9Z0H3 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcb1Q9Z0H3 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smarcb1Q9Z0H3 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smarcb1Q9Z0H3 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smarcb1Q9Z0H3 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.8□□□□□ -0.2
Smarcb1Q9Z0H3 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smarcb1Q9Z0H3 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Smarcb1Q9Z0H3 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.8□□□□□ -0.2
Smarcb1Q9Z0H3 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.8□□□□□ -0.2
Smarcb1Q9Z0H3 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Smarcb1Q9Z0H3 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Smarcb1Q9Z0H3 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
Smarcb1Q9Z0H3 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.8□□□□□ -0.2
Smarcb1Q9Z0H3 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smarcb1Q9Z0H3 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC13.8□□□□□ -0.2
Smarcb1Q9Z0H3 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Smarcb1Q9Z0H3 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC13.8□□□□□ -0.2
Smarcb1Q9Z0H3 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smarcb1Q9Z0H3 Gm37008-201ENSMUST00000195712 319 ntBASIC13.8□□□□□ -0.2
Smarcb1Q9Z0H3 Gm42627-201ENSMUST00000197347 224 ntBASIC13.8□□□□□ -0.2
Smarcb1Q9Z0H3 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Smarcb1Q9Z0H3 Gm18054-201ENSMUST00000207539 555 ntBASIC13.8□□□□□ -0.2
Smarcb1Q9Z0H3 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Smarcb1Q9Z0H3 Gm17823-201ENSMUST00000217830 1006 ntBASIC13.8□□□□□ -0.2
Smarcb1Q9Z0H3 Gm4935-201ENSMUST00000221316 1198 ntBASIC13.8□□□□□ -0.2
Smarcb1Q9Z0H3 AC133598.1-201ENSMUST00000224327 660 ntBASIC13.8□□□□□ -0.2
Smarcb1Q9Z0H3 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smarcb1Q9Z0H3 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smarcb1Q9Z0H3 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.8□□□□□ -0.2
Smarcb1Q9Z0H3 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Smarcb1Q9Z0H3 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smarcb1Q9Z0H3 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Smarcb1Q9Z0H3 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms