Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn8aQ9WTU3 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Scn8aQ9WTU3 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn8aQ9WTU3 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Scn8aQ9WTU3 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Scn8aQ9WTU3 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn8aQ9WTU3 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Scn8aQ9WTU3 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Scn8aQ9WTU3 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn8aQ9WTU3 Gm37827-201ENSMUST00000194486 1542 ntBASIC13.33□□□□□ -0.28
Scn8aQ9WTU3 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn8aQ9WTU3 Gm42853-201ENSMUST00000201273 1387 ntBASIC13.33□□□□□ -0.28
Scn8aQ9WTU3 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Scn8aQ9WTU3 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.33□□□□□ -0.28
Scn8aQ9WTU3 Mir1938-201ENSMUST00000158746 100 ntBASIC13.33□□□□□ -0.28
Scn8aQ9WTU3 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn8aQ9WTU3 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC13.33□□□□□ -0.28
Scn8aQ9WTU3 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Scn8aQ9WTU3 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Scn8aQ9WTU3 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn8aQ9WTU3 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Scn8aQ9WTU3 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Scn8aQ9WTU3 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn8aQ9WTU3 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Scn8aQ9WTU3 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn8aQ9WTU3 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn8aQ9WTU3 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn8aQ9WTU3 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn8aQ9WTU3 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Scn8aQ9WTU3 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Scn8aQ9WTU3 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Scn8aQ9WTU3 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
Scn8aQ9WTU3 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Scn8aQ9WTU3 Trav4d-2-201ENSMUST00000120914 335 ntBASIC13.32□□□□□ -0.28
Scn8aQ9WTU3 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Scn8aQ9WTU3 Gm2231-201ENSMUST00000125661 612 ntBASIC13.32□□□□□ -0.28
Scn8aQ9WTU3 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Scn8aQ9WTU3 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC13.32□□□□□ -0.28
Scn8aQ9WTU3 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.32□□□□□ -0.28
Scn8aQ9WTU3 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Scn8aQ9WTU3 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Scn8aQ9WTU3 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.32□□□□□ -0.28
Scn8aQ9WTU3 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.32□□□□□ -0.28
Scn8aQ9WTU3 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn8aQ9WTU3 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.32□□□□□ -0.28
Scn8aQ9WTU3 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn8aQ9WTU3 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn8aQ9WTU3 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.32□□□□□ -0.28
Scn8aQ9WTU3 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn8aQ9WTU3 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn8aQ9WTU3 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn8aQ9WTU3 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn8aQ9WTU3 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Scn8aQ9WTU3 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn8aQ9WTU3 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn8aQ9WTU3 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn8aQ9WTU3 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn8aQ9WTU3 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Scn8aQ9WTU3 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn8aQ9WTU3 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn8aQ9WTU3 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn8aQ9WTU3 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn8aQ9WTU3 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn8aQ9WTU3 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn8aQ9WTU3 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn8aQ9WTU3 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC13.32□□□□□ -0.28
Scn8aQ9WTU3 Gm8805-201ENSMUST00000117848 313 ntBASIC13.32□□□□□ -0.28
Scn8aQ9WTU3 Gm11591-201ENSMUST00000120063 702 ntBASIC13.32□□□□□ -0.28
Scn8aQ9WTU3 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Scn8aQ9WTU3 Gm7809-201ENSMUST00000153199 742 ntBASIC13.32□□□□□ -0.28
Scn8aQ9WTU3 Gm27572-201ENSMUST00000183702 255 ntBASIC13.32□□□□□ -0.28
Scn8aQ9WTU3 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC13.32□□□□□ -0.28
Scn8aQ9WTU3 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC13.32□□□□□ -0.28
Scn8aQ9WTU3 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn8aQ9WTU3 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn8aQ9WTU3 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Scn8aQ9WTU3 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.32□□□□□ -0.28
Scn8aQ9WTU3 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn8aQ9WTU3 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn8aQ9WTU3 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn8aQ9WTU3 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn8aQ9WTU3 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.32□□□□□ -0.28
Scn8aQ9WTU3 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn8aQ9WTU3 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn8aQ9WTU3 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Scn8aQ9WTU3 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Scn8aQ9WTU3 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Scn8aQ9WTU3 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Scn8aQ9WTU3 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn8aQ9WTU3 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn8aQ9WTU3 Gm14723-201ENSMUST00000118686 215 ntBASIC13.31□□□□□ -0.28
Scn8aQ9WTU3 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Scn8aQ9WTU3 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Scn8aQ9WTU3 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Scn8aQ9WTU3 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC13.31□□□□□ -0.28
Scn8aQ9WTU3 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Scn8aQ9WTU3 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn8aQ9WTU3 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Scn8aQ9WTU3 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Scn8aQ9WTU3 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms