Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.59□□□□□ -0.39
Trim3Q9R1R2 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim3Q9R1R2 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim3Q9R1R2 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim3Q9R1R2 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim3Q9R1R2 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim3Q9R1R2 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim3Q9R1R2 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.59□□□□□ -0.39
Trim3Q9R1R2 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.59□□□□□ -0.39
Trim3Q9R1R2 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.59□□□□□ -0.39
Trim3Q9R1R2 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.59□□□□□ -0.39
Trim3Q9R1R2 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.59□□□□□ -0.39
Trim3Q9R1R2 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Trim3Q9R1R2 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim3Q9R1R2 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trim3Q9R1R2 Gm8927-201ENSMUST00000181978 981 ntBASIC12.59□□□□□ -0.39
Trim3Q9R1R2 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.59□□□□□ -0.39
Trim3Q9R1R2 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.59□□□□□ -0.39
Trim3Q9R1R2 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.59□□□□□ -0.39
Trim3Q9R1R2 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim3Q9R1R2 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.59□□□□□ -0.39
Trim3Q9R1R2 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trim3Q9R1R2 Gm3222-201ENSMUST00000071282 990 ntBASIC12.59□□□□□ -0.39
Trim3Q9R1R2 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim3Q9R1R2 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim3Q9R1R2 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trim3Q9R1R2 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim3Q9R1R2 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim3Q9R1R2 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim3Q9R1R2 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim3Q9R1R2 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim3Q9R1R2 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim3Q9R1R2 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim3Q9R1R2 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim3Q9R1R2 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim3Q9R1R2 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim3Q9R1R2 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trim3Q9R1R2 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trim3Q9R1R2 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trim3Q9R1R2 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trim3Q9R1R2 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim3Q9R1R2 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim3Q9R1R2 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trim3Q9R1R2 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim3Q9R1R2 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trim3Q9R1R2 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trim3Q9R1R2 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Trim3Q9R1R2 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim3Q9R1R2 Mir698-201ENSMUST00000102164 109 ntBASIC12.58□□□□□ -0.4
Trim3Q9R1R2 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.58□□□□□ -0.4
Trim3Q9R1R2 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.58□□□□□ -0.4
Trim3Q9R1R2 Gm13385-201ENSMUST00000121089 220 ntBASIC12.58□□□□□ -0.4
Trim3Q9R1R2 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim3Q9R1R2 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.58□□□□□ -0.4
Trim3Q9R1R2 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.58□□□□□ -0.4
Trim3Q9R1R2 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim3Q9R1R2 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim3Q9R1R2 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim3Q9R1R2 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.58□□□□□ -0.4
Trim3Q9R1R2 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim3Q9R1R2 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim3Q9R1R2 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim3Q9R1R2 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim3Q9R1R2 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trim3Q9R1R2 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim3Q9R1R2 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trim3Q9R1R2 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim3Q9R1R2 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim3Q9R1R2 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trim3Q9R1R2 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.58□□□□□ -0.4
Trim3Q9R1R2 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim3Q9R1R2 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim3Q9R1R2 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim3Q9R1R2 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim3Q9R1R2 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim3Q9R1R2 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim3Q9R1R2 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim3Q9R1R2 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim3Q9R1R2 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim3Q9R1R2 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim3Q9R1R2 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim3Q9R1R2 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim3Q9R1R2 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim3Q9R1R2 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim3Q9R1R2 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim3Q9R1R2 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Trim3Q9R1R2 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim3Q9R1R2 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim3Q9R1R2 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim3Q9R1R2 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.57□□□□□ -0.4
Trim3Q9R1R2 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.57□□□□□ -0.4
Trim3Q9R1R2 Gm5354-201ENSMUST00000182417 973 ntBASIC12.57□□□□□ -0.4
Trim3Q9R1R2 Gm37917-201ENSMUST00000194711 392 ntBASIC12.57□□□□□ -0.4
Trim3Q9R1R2 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.57□□□□□ -0.4
Trim3Q9R1R2 Gm5279-201ENSMUST00000199575 745 ntBASIC12.57□□□□□ -0.4
Trim3Q9R1R2 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trim3Q9R1R2 Gm18905-201ENSMUST00000205454 928 ntBASIC12.57□□□□□ -0.4
Trim3Q9R1R2 Gm19220-201ENSMUST00000222682 803 ntBASIC12.57□□□□□ -0.4
Trim3Q9R1R2 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim3Q9R1R2 Gm15823-201ENSMUST00000064305 670 ntBASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms