Protein–RNA interactions for Protein: Q9R1R0

Lhx6, LIM/homeobox protein Lhx6, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx6Q9R1R0 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lhx6Q9R1R0 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Lhx6Q9R1R0 Gm20528-202ENSMUST00000174821 802 ntTSL 3 BASIC12.97□□□□□ -0.33
Lhx6Q9R1R0 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Lhx6Q9R1R0 Gm27001-201ENSMUST00000182252 936 ntBASIC12.97□□□□□ -0.33
Lhx6Q9R1R0 Gm28356-201ENSMUST00000186941 927 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Lhx6Q9R1R0 1700121L03Rik-201ENSMUST00000187796 704 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Lhx6Q9R1R0 Gm21489-201ENSMUST00000189668 818 ntBASIC12.97□□□□□ -0.33
Lhx6Q9R1R0 Gm38047-201ENSMUST00000193690 1133 ntBASIC12.97□□□□□ -0.33
Lhx6Q9R1R0 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lhx6Q9R1R0 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC12.97□□□□□ -0.33
Lhx6Q9R1R0 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lhx6Q9R1R0 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lhx6Q9R1R0 Gm6091-201ENSMUST00000098307 165 ntBASIC12.97□□□□□ -0.33
Lhx6Q9R1R0 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Lhx6Q9R1R0 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lhx6Q9R1R0 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lhx6Q9R1R0 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Lhx6Q9R1R0 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Lhx6Q9R1R0 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lhx6Q9R1R0 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lhx6Q9R1R0 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lhx6Q9R1R0 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lhx6Q9R1R0 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lhx6Q9R1R0 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lhx6Q9R1R0 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lhx6Q9R1R0 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lhx6Q9R1R0 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lhx6Q9R1R0 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lhx6Q9R1R0 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lhx6Q9R1R0 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lhx6Q9R1R0 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Lhx6Q9R1R0 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lhx6Q9R1R0 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Lhx6Q9R1R0 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC12.96□□□□□ -0.33
Lhx6Q9R1R0 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.96□□□□□ -0.33
Lhx6Q9R1R0 Gm15595-201ENSMUST00000120840 961 ntBASIC12.96□□□□□ -0.33
Lhx6Q9R1R0 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Lhx6Q9R1R0 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC12.96□□□□□ -0.33
Lhx6Q9R1R0 Vmn1r-ps52-201ENSMUST00000177426 862 ntBASIC12.96□□□□□ -0.33
Lhx6Q9R1R0 Odaph-201ENSMUST00000178614 760 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lhx6Q9R1R0 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Lhx6Q9R1R0 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.96□□□□□ -0.33
Lhx6Q9R1R0 Gm2451-201ENSMUST00000199447 999 ntBASIC12.96□□□□□ -0.33
Lhx6Q9R1R0 Gm10290-201ENSMUST00000200451 999 ntBASIC12.96□□□□□ -0.33
Lhx6Q9R1R0 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Lhx6Q9R1R0 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Lhx6Q9R1R0 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lhx6Q9R1R0 Gm44809-201ENSMUST00000208305 993 ntBASIC12.96□□□□□ -0.33
Lhx6Q9R1R0 Gm31135-202ENSMUST00000208946 1155 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Lhx6Q9R1R0 Gm7561-201ENSMUST00000211203 886 ntBASIC12.96□□□□□ -0.33
Lhx6Q9R1R0 AC096628.1-201ENSMUST00000226060 641 ntBASIC12.96□□□□□ -0.33
Lhx6Q9R1R0 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Lhx6Q9R1R0 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.96□□□□□ -0.33
Lhx6Q9R1R0 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lhx6Q9R1R0 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.96□□□□□ -0.33
Lhx6Q9R1R0 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lhx6Q9R1R0 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lhx6Q9R1R0 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lhx6Q9R1R0 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Lhx6Q9R1R0 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lhx6Q9R1R0 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lhx6Q9R1R0 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lhx6Q9R1R0 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Lhx6Q9R1R0 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lhx6Q9R1R0 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lhx6Q9R1R0 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Lhx6Q9R1R0 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Lhx6Q9R1R0 Olfr1140-201ENSMUST00000214723 1421 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Lhx6Q9R1R0 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Lhx6Q9R1R0 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lhx6Q9R1R0 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Lhx6Q9R1R0 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Lhx6Q9R1R0 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Lhx6Q9R1R0 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lhx6Q9R1R0 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lhx6Q9R1R0 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lhx6Q9R1R0 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lhx6Q9R1R0 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lhx6Q9R1R0 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lhx6Q9R1R0 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Lhx6Q9R1R0 4930456G14Rik-201ENSMUST00000193054 1330 ntBASIC12.95□□□□□ -0.34
Lhx6Q9R1R0 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lhx6Q9R1R0 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lhx6Q9R1R0 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lhx6Q9R1R0 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.95□□□□□ -0.34
Lhx6Q9R1R0 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Lhx6Q9R1R0 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Lhx6Q9R1R0 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lhx6Q9R1R0 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC12.95□□□□□ -0.34
Lhx6Q9R1R0 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Lhx6Q9R1R0 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.95□□□□□ -0.34
Lhx6Q9R1R0 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Lhx6Q9R1R0 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
Lhx6Q9R1R0 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lhx6Q9R1R0 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC12.95□□□□□ -0.34
Lhx6Q9R1R0 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Lhx6Q9R1R0 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Lhx6Q9R1R0 Smim8-205ENSMUST00000108134 782 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Lhx6Q9R1R0 Olfr1127-ps1-201ENSMUST00000119555 892 ntBASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms