Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.95□□□□□ -0.5
Trem1Q9JKE2 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trem1Q9JKE2 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Trem1Q9JKE2 AC129336.1-201ENSMUST00000220224 2277 ntBASIC11.95□□□□□ -0.5
Trem1Q9JKE2 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trem1Q9JKE2 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trem1Q9JKE2 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.95□□□□□ -0.5
Trem1Q9JKE2 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.95□□□□□ -0.5
Trem1Q9JKE2 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trem1Q9JKE2 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trem1Q9JKE2 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Trem1Q9JKE2 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trem1Q9JKE2 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trem1Q9JKE2 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trem1Q9JKE2 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trem1Q9JKE2 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC11.94□□□□□ -0.5
Trem1Q9JKE2 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trem1Q9JKE2 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC11.94□□□□□ -0.5
Trem1Q9JKE2 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trem1Q9JKE2 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trem1Q9JKE2 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trem1Q9JKE2 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trem1Q9JKE2 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trem1Q9JKE2 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Trem1Q9JKE2 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Trem1Q9JKE2 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trem1Q9JKE2 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trem1Q9JKE2 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trem1Q9JKE2 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trem1Q9JKE2 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trem1Q9JKE2 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC11.94□□□□□ -0.5
Trem1Q9JKE2 Gm18669-201ENSMUST00000216049 778 ntBASIC11.94□□□□□ -0.5
Trem1Q9JKE2 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC11.94□□□□□ -0.5
Trem1Q9JKE2 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trem1Q9JKE2 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trem1Q9JKE2 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Trem1Q9JKE2 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trem1Q9JKE2 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Trem1Q9JKE2 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Trem1Q9JKE2 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
Trem1Q9JKE2 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trem1Q9JKE2 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trem1Q9JKE2 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC11.94□□□□□ -0.5
Trem1Q9JKE2 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trem1Q9JKE2 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trem1Q9JKE2 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trem1Q9JKE2 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trem1Q9JKE2 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trem1Q9JKE2 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trem1Q9JKE2 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trem1Q9JKE2 Gm18856-201ENSMUST00000178096 1374 ntBASIC11.93□□□□□ -0.5
Trem1Q9JKE2 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trem1Q9JKE2 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.93□□□□□ -0.5
Trem1Q9JKE2 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trem1Q9JKE2 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trem1Q9JKE2 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trem1Q9JKE2 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trem1Q9JKE2 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trem1Q9JKE2 Gm8096-201ENSMUST00000209921 1591 ntBASIC11.93□□□□□ -0.5
Trem1Q9JKE2 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC11.93□□□□□ -0.5
Trem1Q9JKE2 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trem1Q9JKE2 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trem1Q9JKE2 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.93□□□□□ -0.5
Trem1Q9JKE2 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trem1Q9JKE2 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trem1Q9JKE2 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trem1Q9JKE2 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trem1Q9JKE2 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trem1Q9JKE2 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trem1Q9JKE2 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trem1Q9JKE2 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trem1Q9JKE2 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Trem1Q9JKE2 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trem1Q9JKE2 Spr-ps1-201ENSMUST00000089584 605 ntBASIC11.93□□□□□ -0.5
Trem1Q9JKE2 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trem1Q9JKE2 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trem1Q9JKE2 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trem1Q9JKE2 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trem1Q9JKE2 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC11.93□□□□□ -0.5
Trem1Q9JKE2 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trem1Q9JKE2 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trem1Q9JKE2 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trem1Q9JKE2 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC11.93□□□□□ -0.5
Trem1Q9JKE2 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trem1Q9JKE2 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trem1Q9JKE2 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trem1Q9JKE2 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trem1Q9JKE2 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC11.93□□□□□ -0.5
Trem1Q9JKE2 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trem1Q9JKE2 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trem1Q9JKE2 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trem1Q9JKE2 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.92□□□□□ -0.5
Trem1Q9JKE2 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trem1Q9JKE2 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trem1Q9JKE2 Gm13294-201ENSMUST00000121757 1330 ntBASIC11.92□□□□□ -0.5
Trem1Q9JKE2 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trem1Q9JKE2 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trem1Q9JKE2 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trem1Q9JKE2 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trem1Q9JKE2 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms