Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ube3bQ9ES34 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC15.84■□□□□ 0.13
Ube3bQ9ES34 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ube3bQ9ES34 Gm5466-201ENSMUST00000119395 1890 ntBASIC15.84■□□□□ 0.13
Ube3bQ9ES34 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Ube3bQ9ES34 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ube3bQ9ES34 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ube3bQ9ES34 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ube3bQ9ES34 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ube3bQ9ES34 Gm43423-201ENSMUST00000198390 2094 ntBASIC15.83■□□□□ 0.13
Ube3bQ9ES34 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ube3bQ9ES34 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ube3bQ9ES34 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ube3bQ9ES34 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Ube3bQ9ES34 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ube3bQ9ES34 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ube3bQ9ES34 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ube3bQ9ES34 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ube3bQ9ES34 Gm12742-201ENSMUST00000117326 410 ntBASIC15.83■□□□□ 0.12
Ube3bQ9ES34 Gm11637-201ENSMUST00000120601 592 ntBASIC15.83■□□□□ 0.12
Ube3bQ9ES34 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC15.83■□□□□ 0.12
Ube3bQ9ES34 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC15.83■□□□□ 0.12
Ube3bQ9ES34 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ube3bQ9ES34 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC15.83■□□□□ 0.12
Ube3bQ9ES34 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC15.83■□□□□ 0.12
Ube3bQ9ES34 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ube3bQ9ES34 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ube3bQ9ES34 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ube3bQ9ES34 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ube3bQ9ES34 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ube3bQ9ES34 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ube3bQ9ES34 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ube3bQ9ES34 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ube3bQ9ES34 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ube3bQ9ES34 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ube3bQ9ES34 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Ube3bQ9ES34 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Ube3bQ9ES34 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC15.83■□□□□ 0.12
Ube3bQ9ES34 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ube3bQ9ES34 Gm14608-201ENSMUST00000120030 1553 ntBASIC15.83■□□□□ 0.12
Ube3bQ9ES34 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ube3bQ9ES34 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ube3bQ9ES34 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ube3bQ9ES34 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC15.82■□□□□ 0.12
Ube3bQ9ES34 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ube3bQ9ES34 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ube3bQ9ES34 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ube3bQ9ES34 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ube3bQ9ES34 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ube3bQ9ES34 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ube3bQ9ES34 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC15.82■□□□□ 0.12
Ube3bQ9ES34 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Ube3bQ9ES34 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ube3bQ9ES34 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Ube3bQ9ES34 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ube3bQ9ES34 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC15.82■□□□□ 0.12
Ube3bQ9ES34 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ube3bQ9ES34 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
Ube3bQ9ES34 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC15.82■□□□□ 0.12
Ube3bQ9ES34 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC15.82■□□□□ 0.12
Ube3bQ9ES34 Gm28196-201ENSMUST00000187719 640 ntBASIC15.82■□□□□ 0.12
Ube3bQ9ES34 AC125350.2-201ENSMUST00000224737 727 ntBASIC15.82■□□□□ 0.12
Ube3bQ9ES34 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ube3bQ9ES34 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ube3bQ9ES34 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ube3bQ9ES34 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ube3bQ9ES34 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC15.82■□□□□ 0.12
Ube3bQ9ES34 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ube3bQ9ES34 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ube3bQ9ES34 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ube3bQ9ES34 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ube3bQ9ES34 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC15.82■□□□□ 0.12
Ube3bQ9ES34 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ube3bQ9ES34 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ube3bQ9ES34 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ube3bQ9ES34 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ube3bQ9ES34 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ube3bQ9ES34 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ube3bQ9ES34 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ube3bQ9ES34 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Ube3bQ9ES34 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ube3bQ9ES34 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC15.81■□□□□ 0.12
Ube3bQ9ES34 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ube3bQ9ES34 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ube3bQ9ES34 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ube3bQ9ES34 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
Ube3bQ9ES34 Mir874-201ENSMUST00000104769 76 ntBASIC15.81■□□□□ 0.12
Ube3bQ9ES34 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ube3bQ9ES34 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC15.81■□□□□ 0.12
Ube3bQ9ES34 Gm16479-201ENSMUST00000121706 932 ntBASIC15.81■□□□□ 0.12
Ube3bQ9ES34 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ube3bQ9ES34 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ube3bQ9ES34 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ube3bQ9ES34 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
Ube3bQ9ES34 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ube3bQ9ES34 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Ube3bQ9ES34 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Ube3bQ9ES34 Gm30238-201ENSMUST00000195528 2603 ntBASIC15.81■□□□□ 0.12
Ube3bQ9ES34 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ube3bQ9ES34 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms