Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC14.46□□□□□ -0.09
Trim54Q9ERP3 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC14.46□□□□□ -0.09
Trim54Q9ERP3 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trim54Q9ERP3 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC14.46□□□□□ -0.09
Trim54Q9ERP3 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim54Q9ERP3 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim54Q9ERP3 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim54Q9ERP3 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC14.46□□□□□ -0.09
Trim54Q9ERP3 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trim54Q9ERP3 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Trim54Q9ERP3 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trim54Q9ERP3 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
Trim54Q9ERP3 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Trim54Q9ERP3 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trim54Q9ERP3 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Trim54Q9ERP3 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trim54Q9ERP3 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim54Q9ERP3 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim54Q9ERP3 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim54Q9ERP3 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim54Q9ERP3 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim54Q9ERP3 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim54Q9ERP3 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim54Q9ERP3 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim54Q9ERP3 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim54Q9ERP3 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Trim54Q9ERP3 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim54Q9ERP3 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim54Q9ERP3 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim54Q9ERP3 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim54Q9ERP3 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim54Q9ERP3 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim54Q9ERP3 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim54Q9ERP3 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim54Q9ERP3 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim54Q9ERP3 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim54Q9ERP3 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC14.45□□□□□ -0.1
Trim54Q9ERP3 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim54Q9ERP3 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim54Q9ERP3 Gm16372-201ENSMUST00000073088 450 ntBASIC14.45□□□□□ -0.1
Trim54Q9ERP3 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim54Q9ERP3 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim54Q9ERP3 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim54Q9ERP3 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.45□□□□□ -0.1
Trim54Q9ERP3 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim54Q9ERP3 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trim54Q9ERP3 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim54Q9ERP3 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim54Q9ERP3 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trim54Q9ERP3 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim54Q9ERP3 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim54Q9ERP3 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trim54Q9ERP3 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim54Q9ERP3 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim54Q9ERP3 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim54Q9ERP3 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Trim54Q9ERP3 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim54Q9ERP3 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim54Q9ERP3 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.44□□□□□ -0.1
Trim54Q9ERP3 Gm45684-201ENSMUST00000210244 1571 ntBASIC14.44□□□□□ -0.1
Trim54Q9ERP3 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Trim54Q9ERP3 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim54Q9ERP3 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim54Q9ERP3 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Trim54Q9ERP3 Mir686-201ENSMUST00000102174 109 ntBASIC14.44□□□□□ -0.1
Trim54Q9ERP3 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC14.44□□□□□ -0.1
Trim54Q9ERP3 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC14.44□□□□□ -0.1
Trim54Q9ERP3 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC14.44□□□□□ -0.1
Trim54Q9ERP3 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim54Q9ERP3 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Trim54Q9ERP3 Gm38002-201ENSMUST00000193255 180 ntBASIC14.44□□□□□ -0.1
Trim54Q9ERP3 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim54Q9ERP3 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim54Q9ERP3 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC14.44□□□□□ -0.1
Trim54Q9ERP3 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Trim54Q9ERP3 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim54Q9ERP3 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Trim54Q9ERP3 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim54Q9ERP3 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim54Q9ERP3 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim54Q9ERP3 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim54Q9ERP3 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim54Q9ERP3 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim54Q9ERP3 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim54Q9ERP3 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim54Q9ERP3 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trim54Q9ERP3 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.44□□□□□ -0.1
Trim54Q9ERP3 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim54Q9ERP3 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim54Q9ERP3 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim54Q9ERP3 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trim54Q9ERP3 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim54Q9ERP3 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC14.43□□□□□ -0.1
Trim54Q9ERP3 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim54Q9ERP3 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.43□□□□□ -0.1
Trim54Q9ERP3 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim54Q9ERP3 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim54Q9ERP3 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim54Q9ERP3 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim54Q9ERP3 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms