Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tubb3Q9ERD7 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tubb3Q9ERD7 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tubb3Q9ERD7 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tubb3Q9ERD7 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tubb3Q9ERD7 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Tubb3Q9ERD7 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.29□□□□□ -0.28
Tubb3Q9ERD7 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tubb3Q9ERD7 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tubb3Q9ERD7 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tubb3Q9ERD7 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Tubb3Q9ERD7 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Tubb3Q9ERD7 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Tubb3Q9ERD7 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC13.28□□□□□ -0.28
Tubb3Q9ERD7 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.28□□□□□ -0.28
Tubb3Q9ERD7 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.28□□□□□ -0.28
Tubb3Q9ERD7 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Tubb3Q9ERD7 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Tubb3Q9ERD7 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Tubb3Q9ERD7 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.28□□□□□ -0.28
Tubb3Q9ERD7 Ldha-ps-201ENSMUST00000119390 995 ntBASIC13.28□□□□□ -0.28
Tubb3Q9ERD7 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.28□□□□□ -0.28
Tubb3Q9ERD7 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.28□□□□□ -0.28
Tubb3Q9ERD7 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC13.28□□□□□ -0.28
Tubb3Q9ERD7 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Tubb3Q9ERD7 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.28□□□□□ -0.28
Tubb3Q9ERD7 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.28□□□□□ -0.28
Tubb3Q9ERD7 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tubb3Q9ERD7 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Tubb3Q9ERD7 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tubb3Q9ERD7 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Tubb3Q9ERD7 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Tubb3Q9ERD7 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tubb3Q9ERD7 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tubb3Q9ERD7 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tubb3Q9ERD7 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Tubb3Q9ERD7 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tubb3Q9ERD7 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tubb3Q9ERD7 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tubb3Q9ERD7 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tubb3Q9ERD7 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Tubb3Q9ERD7 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tubb3Q9ERD7 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tubb3Q9ERD7 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tubb3Q9ERD7 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Tubb3Q9ERD7 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tubb3Q9ERD7 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Tubb3Q9ERD7 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Tubb3Q9ERD7 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tubb3Q9ERD7 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Tubb3Q9ERD7 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Tubb3Q9ERD7 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tubb3Q9ERD7 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Tubb3Q9ERD7 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tubb3Q9ERD7 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tubb3Q9ERD7 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tubb3Q9ERD7 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Tubb3Q9ERD7 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Tubb3Q9ERD7 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.27□□□□□ -0.29
Tubb3Q9ERD7 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tubb3Q9ERD7 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Tubb3Q9ERD7 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Tubb3Q9ERD7 Gm5354-201ENSMUST00000182417 973 ntBASIC13.27□□□□□ -0.29
Tubb3Q9ERD7 Mir6392-201ENSMUST00000184924 108 ntBASIC13.27□□□□□ -0.29
Tubb3Q9ERD7 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tubb3Q9ERD7 Gm17795-201ENSMUST00000214505 757 ntBASIC13.27□□□□□ -0.29
Tubb3Q9ERD7 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Tubb3Q9ERD7 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.27□□□□□ -0.29
Tubb3Q9ERD7 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tubb3Q9ERD7 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Tubb3Q9ERD7 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tubb3Q9ERD7 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tubb3Q9ERD7 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
Tubb3Q9ERD7 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tubb3Q9ERD7 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tubb3Q9ERD7 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tubb3Q9ERD7 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tubb3Q9ERD7 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tubb3Q9ERD7 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tubb3Q9ERD7 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tubb3Q9ERD7 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tubb3Q9ERD7 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Tubb3Q9ERD7 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Tubb3Q9ERD7 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Tubb3Q9ERD7 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tubb3Q9ERD7 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tubb3Q9ERD7 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tubb3Q9ERD7 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Tubb3Q9ERD7 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tubb3Q9ERD7 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tubb3Q9ERD7 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Tubb3Q9ERD7 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tubb3Q9ERD7 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tubb3Q9ERD7 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tubb3Q9ERD7 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tubb3Q9ERD7 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tubb3Q9ERD7 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tubb3Q9ERD7 Gm15678-201ENSMUST00000117573 960 ntBASIC13.26□□□□□ -0.29
Tubb3Q9ERD7 Gm11478-201ENSMUST00000117851 599 ntBASIC13.26□□□□□ -0.29
Tubb3Q9ERD7 Gm12138-201ENSMUST00000122180 951 ntBASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms