Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sf3a3Q9D554 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sf3a3Q9D554 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Sf3a3Q9D554 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sf3a3Q9D554 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sf3a3Q9D554 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sf3a3Q9D554 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sf3a3Q9D554 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Sf3a3Q9D554 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sf3a3Q9D554 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sf3a3Q9D554 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Sf3a3Q9D554 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sf3a3Q9D554 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC13.49□□□□□ -0.25
Sf3a3Q9D554 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sf3a3Q9D554 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.49□□□□□ -0.25
Sf3a3Q9D554 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sf3a3Q9D554 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sf3a3Q9D554 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Sf3a3Q9D554 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sf3a3Q9D554 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.49□□□□□ -0.25
Sf3a3Q9D554 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sf3a3Q9D554 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sf3a3Q9D554 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sf3a3Q9D554 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sf3a3Q9D554 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sf3a3Q9D554 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Sf3a3Q9D554 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sf3a3Q9D554 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sf3a3Q9D554 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sf3a3Q9D554 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sf3a3Q9D554 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Sf3a3Q9D554 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.49□□□□□ -0.25
Sf3a3Q9D554 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sf3a3Q9D554 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sf3a3Q9D554 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sf3a3Q9D554 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Sf3a3Q9D554 Gm43463-201ENSMUST00000195967 1803 ntBASIC13.48□□□□□ -0.25
Sf3a3Q9D554 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Sf3a3Q9D554 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sf3a3Q9D554 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sf3a3Q9D554 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sf3a3Q9D554 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sf3a3Q9D554 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sf3a3Q9D554 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sf3a3Q9D554 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sf3a3Q9D554 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sf3a3Q9D554 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC13.48□□□□□ -0.25
Sf3a3Q9D554 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC13.48□□□□□ -0.25
Sf3a3Q9D554 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Sf3a3Q9D554 Gm44608-201ENSMUST00000206827 855 ntBASIC13.48□□□□□ -0.25
Sf3a3Q9D554 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sf3a3Q9D554 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.48□□□□□ -0.25
Sf3a3Q9D554 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sf3a3Q9D554 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sf3a3Q9D554 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC13.48□□□□□ -0.25
Sf3a3Q9D554 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sf3a3Q9D554 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sf3a3Q9D554 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC13.48□□□□□ -0.25
Sf3a3Q9D554 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sf3a3Q9D554 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sf3a3Q9D554 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sf3a3Q9D554 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sf3a3Q9D554 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.47□□□□□ -0.25
Sf3a3Q9D554 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.47□□□□□ -0.25
Sf3a3Q9D554 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sf3a3Q9D554 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sf3a3Q9D554 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Sf3a3Q9D554 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC13.47□□□□□ -0.25
Sf3a3Q9D554 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Sf3a3Q9D554 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC13.47□□□□□ -0.25
Sf3a3Q9D554 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sf3a3Q9D554 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC13.47□□□□□ -0.25
Sf3a3Q9D554 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sf3a3Q9D554 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC13.47□□□□□ -0.25
Sf3a3Q9D554 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sf3a3Q9D554 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sf3a3Q9D554 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sf3a3Q9D554 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sf3a3Q9D554 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sf3a3Q9D554 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.47□□□□□ -0.25
Sf3a3Q9D554 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC13.47□□□□□ -0.25
Sf3a3Q9D554 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
Sf3a3Q9D554 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
Sf3a3Q9D554 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sf3a3Q9D554 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sf3a3Q9D554 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Sf3a3Q9D554 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sf3a3Q9D554 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.47□□□□□ -0.25
Sf3a3Q9D554 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sf3a3Q9D554 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sf3a3Q9D554 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.47□□□□□ -0.25
Sf3a3Q9D554 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sf3a3Q9D554 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sf3a3Q9D554 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Sf3a3Q9D554 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Sf3a3Q9D554 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sf3a3Q9D554 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sf3a3Q9D554 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Sf3a3Q9D554 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.46□□□□□ -0.25
Sf3a3Q9D554 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms