Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim42Q9D2H5 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim42Q9D2H5 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim42Q9D2H5 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC13.37□□□□□ -0.27
Trim42Q9D2H5 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim42Q9D2H5 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trim42Q9D2H5 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim42Q9D2H5 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim42Q9D2H5 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim42Q9D2H5 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Trim42Q9D2H5 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.37□□□□□ -0.27
Trim42Q9D2H5 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.37□□□□□ -0.27
Trim42Q9D2H5 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.37□□□□□ -0.27
Trim42Q9D2H5 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC13.37□□□□□ -0.27
Trim42Q9D2H5 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.37□□□□□ -0.27
Trim42Q9D2H5 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim42Q9D2H5 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC13.37□□□□□ -0.27
Trim42Q9D2H5 Gm44771-201ENSMUST00000206975 626 ntBASIC13.37□□□□□ -0.27
Trim42Q9D2H5 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim42Q9D2H5 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim42Q9D2H5 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Trim42Q9D2H5 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim42Q9D2H5 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
Trim42Q9D2H5 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trim42Q9D2H5 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim42Q9D2H5 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim42Q9D2H5 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim42Q9D2H5 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trim42Q9D2H5 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim42Q9D2H5 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC13.37□□□□□ -0.27
Trim42Q9D2H5 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim42Q9D2H5 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Trim42Q9D2H5 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Trim42Q9D2H5 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trim42Q9D2H5 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim42Q9D2H5 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim42Q9D2H5 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim42Q9D2H5 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim42Q9D2H5 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim42Q9D2H5 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim42Q9D2H5 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.36□□□□□ -0.27
Trim42Q9D2H5 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim42Q9D2H5 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim42Q9D2H5 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim42Q9D2H5 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trim42Q9D2H5 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim42Q9D2H5 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim42Q9D2H5 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim42Q9D2H5 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim42Q9D2H5 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC13.36□□□□□ -0.27
Trim42Q9D2H5 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC13.36□□□□□ -0.27
Trim42Q9D2H5 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC13.36□□□□□ -0.27
Trim42Q9D2H5 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim42Q9D2H5 Gm44492-201ENSMUST00000197012 141 ntBASIC13.36□□□□□ -0.27
Trim42Q9D2H5 Gm45453-201ENSMUST00000211758 853 ntBASIC13.36□□□□□ -0.27
Trim42Q9D2H5 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim42Q9D2H5 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC13.36□□□□□ -0.27
Trim42Q9D2H5 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.36□□□□□ -0.27
Trim42Q9D2H5 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim42Q9D2H5 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim42Q9D2H5 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim42Q9D2H5 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim42Q9D2H5 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim42Q9D2H5 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim42Q9D2H5 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim42Q9D2H5 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim42Q9D2H5 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim42Q9D2H5 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim42Q9D2H5 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim42Q9D2H5 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim42Q9D2H5 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trim42Q9D2H5 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trim42Q9D2H5 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trim42Q9D2H5 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim42Q9D2H5 Rab3c-202ENSMUST00000223922 2398 ntBASIC13.36□□□□□ -0.27
Trim42Q9D2H5 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Trim42Q9D2H5 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trim42Q9D2H5 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC13.36□□□□□ -0.27
Trim42Q9D2H5 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim42Q9D2H5 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim42Q9D2H5 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.36□□□□□ -0.27
Trim42Q9D2H5 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim42Q9D2H5 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim42Q9D2H5 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim42Q9D2H5 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim42Q9D2H5 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim42Q9D2H5 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim42Q9D2H5 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim42Q9D2H5 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim42Q9D2H5 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Trim42Q9D2H5 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Trim42Q9D2H5 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim42Q9D2H5 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim42Q9D2H5 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC13.35□□□□□ -0.27
Trim42Q9D2H5 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.35□□□□□ -0.27
Trim42Q9D2H5 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.35□□□□□ -0.27
Trim42Q9D2H5 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.35□□□□□ -0.27
Trim42Q9D2H5 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Trim42Q9D2H5 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim42Q9D2H5 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms