Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC10.85□□□□□ -0.67
Hdhd3Q9CYW4 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Hdhd3Q9CYW4 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hdhd3Q9CYW4 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC10.85□□□□□ -0.67
Hdhd3Q9CYW4 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
Hdhd3Q9CYW4 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC10.85□□□□□ -0.67
Hdhd3Q9CYW4 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hdhd3Q9CYW4 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC10.85□□□□□ -0.67
Hdhd3Q9CYW4 Mir3113-201ENSMUST00000175478 76 ntBASIC10.85□□□□□ -0.67
Hdhd3Q9CYW4 Gm8116-201ENSMUST00000182917 1201 ntBASIC10.85□□□□□ -0.67
Hdhd3Q9CYW4 Ighv1-25-201ENSMUST00000195638 345 ntBASIC10.85□□□□□ -0.67
Hdhd3Q9CYW4 Gm6916-202ENSMUST00000205523 195 ntBASIC10.85□□□□□ -0.67
Hdhd3Q9CYW4 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hdhd3Q9CYW4 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Hdhd3Q9CYW4 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hdhd3Q9CYW4 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hdhd3Q9CYW4 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Hdhd3Q9CYW4 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Hdhd3Q9CYW4 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hdhd3Q9CYW4 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC10.85□□□□□ -0.67
Hdhd3Q9CYW4 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hdhd3Q9CYW4 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hdhd3Q9CYW4 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hdhd3Q9CYW4 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hdhd3Q9CYW4 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hdhd3Q9CYW4 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hdhd3Q9CYW4 Nrn1-204ENSMUST00000224323 1779 ntBASIC10.85□□□□□ -0.67
Hdhd3Q9CYW4 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hdhd3Q9CYW4 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hdhd3Q9CYW4 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hdhd3Q9CYW4 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hdhd3Q9CYW4 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hdhd3Q9CYW4 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hdhd3Q9CYW4 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC10.84□□□□□ -0.67
Hdhd3Q9CYW4 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hdhd3Q9CYW4 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hdhd3Q9CYW4 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hdhd3Q9CYW4 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hdhd3Q9CYW4 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hdhd3Q9CYW4 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hdhd3Q9CYW4 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hdhd3Q9CYW4 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hdhd3Q9CYW4 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC10.84□□□□□ -0.67
Hdhd3Q9CYW4 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hdhd3Q9CYW4 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hdhd3Q9CYW4 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Hdhd3Q9CYW4 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Hdhd3Q9CYW4 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC10.84□□□□□ -0.67
Hdhd3Q9CYW4 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Hdhd3Q9CYW4 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hdhd3Q9CYW4 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hdhd3Q9CYW4 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hdhd3Q9CYW4 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hdhd3Q9CYW4 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hdhd3Q9CYW4 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hdhd3Q9CYW4 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hdhd3Q9CYW4 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hdhd3Q9CYW4 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hdhd3Q9CYW4 Rnf17-202ENSMUST00000223627 2077 ntBASIC10.84□□□□□ -0.67
Hdhd3Q9CYW4 Gm42480-201ENSMUST00000198434 2595 ntBASIC10.84□□□□□ -0.67
Hdhd3Q9CYW4 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hdhd3Q9CYW4 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC10.84□□□□□ -0.67
Hdhd3Q9CYW4 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hdhd3Q9CYW4 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hdhd3Q9CYW4 AC125108.1-201ENSMUST00000218986 2330 ntBASIC10.84□□□□□ -0.67
Hdhd3Q9CYW4 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Hdhd3Q9CYW4 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hdhd3Q9CYW4 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hdhd3Q9CYW4 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hdhd3Q9CYW4 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Hdhd3Q9CYW4 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Hdhd3Q9CYW4 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hdhd3Q9CYW4 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hdhd3Q9CYW4 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hdhd3Q9CYW4 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC10.83□□□□□ -0.68
Hdhd3Q9CYW4 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hdhd3Q9CYW4 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC10.83□□□□□ -0.68
Hdhd3Q9CYW4 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
Hdhd3Q9CYW4 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hdhd3Q9CYW4 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC10.83□□□□□ -0.68
Hdhd3Q9CYW4 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hdhd3Q9CYW4 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hdhd3Q9CYW4 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hdhd3Q9CYW4 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hdhd3Q9CYW4 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hdhd3Q9CYW4 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Hdhd3Q9CYW4 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Hdhd3Q9CYW4 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hdhd3Q9CYW4 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hdhd3Q9CYW4 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC10.83□□□□□ -0.68
Hdhd3Q9CYW4 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
Hdhd3Q9CYW4 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC10.83□□□□□ -0.68
Hdhd3Q9CYW4 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC10.83□□□□□ -0.68
Hdhd3Q9CYW4 AC155252.2-201ENSMUST00000226946 680 ntBASIC10.83□□□□□ -0.68
Hdhd3Q9CYW4 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hdhd3Q9CYW4 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Hdhd3Q9CYW4 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hdhd3Q9CYW4 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Hdhd3Q9CYW4 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hdhd3Q9CYW4 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms