Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smc3Q9CW03 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smc3Q9CW03 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smc3Q9CW03 Gm15459-201ENSMUST00000117405 1941 ntBASIC15.72■□□□□ 0.11
Smc3Q9CW03 Gm8355-201ENSMUST00000177767 1941 ntBASIC15.72■□□□□ 0.11
Smc3Q9CW03 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smc3Q9CW03 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Smc3Q9CW03 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC15.72■□□□□ 0.11
Smc3Q9CW03 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smc3Q9CW03 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Smc3Q9CW03 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smc3Q9CW03 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smc3Q9CW03 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smc3Q9CW03 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Smc3Q9CW03 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smc3Q9CW03 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smc3Q9CW03 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smc3Q9CW03 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smc3Q9CW03 AC154747.3-201ENSMUST00000224471 3470 ntBASIC15.71■□□□□ 0.11
Smc3Q9CW03 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smc3Q9CW03 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Smc3Q9CW03 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smc3Q9CW03 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smc3Q9CW03 Gm13616-201ENSMUST00000120600 222 ntBASIC15.71■□□□□ 0.11
Smc3Q9CW03 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smc3Q9CW03 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smc3Q9CW03 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smc3Q9CW03 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC15.71■□□□□ 0.11
Smc3Q9CW03 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smc3Q9CW03 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Smc3Q9CW03 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Smc3Q9CW03 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smc3Q9CW03 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smc3Q9CW03 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smc3Q9CW03 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Smc3Q9CW03 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smc3Q9CW03 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smc3Q9CW03 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Smc3Q9CW03 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Smc3Q9CW03 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Smc3Q9CW03 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Smc3Q9CW03 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Smc3Q9CW03 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smc3Q9CW03 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Smc3Q9CW03 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC15.7■□□□□ 0.1
Smc3Q9CW03 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smc3Q9CW03 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smc3Q9CW03 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smc3Q9CW03 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smc3Q9CW03 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smc3Q9CW03 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smc3Q9CW03 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smc3Q9CW03 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smc3Q9CW03 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smc3Q9CW03 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Smc3Q9CW03 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smc3Q9CW03 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Smc3Q9CW03 Gm37171-201ENSMUST00000192636 1185 ntBASIC15.7■□□□□ 0.1
Smc3Q9CW03 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
Smc3Q9CW03 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smc3Q9CW03 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smc3Q9CW03 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Smc3Q9CW03 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smc3Q9CW03 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Smc3Q9CW03 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smc3Q9CW03 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smc3Q9CW03 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smc3Q9CW03 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smc3Q9CW03 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smc3Q9CW03 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smc3Q9CW03 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smc3Q9CW03 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Smc3Q9CW03 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smc3Q9CW03 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Smc3Q9CW03 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smc3Q9CW03 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smc3Q9CW03 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Smc3Q9CW03 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Smc3Q9CW03 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smc3Q9CW03 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smc3Q9CW03 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Smc3Q9CW03 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smc3Q9CW03 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smc3Q9CW03 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Smc3Q9CW03 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Smc3Q9CW03 AC137842.1-201ENSMUST00000227896 2064 ntBASIC15.69■□□□□ 0.1
Smc3Q9CW03 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Smc3Q9CW03 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smc3Q9CW03 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Smc3Q9CW03 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smc3Q9CW03 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Smc3Q9CW03 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC15.69■□□□□ 0.1
Smc3Q9CW03 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Smc3Q9CW03 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC15.69■□□□□ 0.1
Smc3Q9CW03 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Smc3Q9CW03 Gm17330-201ENSMUST00000221047 165 ntBASIC15.69■□□□□ 0.1
Smc3Q9CW03 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smc3Q9CW03 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smc3Q9CW03 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Smc3Q9CW03 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms