Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lrrc40Q9CRC8 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lrrc40Q9CRC8 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Lrrc40Q9CRC8 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lrrc40Q9CRC8 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lrrc40Q9CRC8 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Lrrc40Q9CRC8 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lrrc40Q9CRC8 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Lrrc40Q9CRC8 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lrrc40Q9CRC8 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Lrrc40Q9CRC8 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lrrc40Q9CRC8 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lrrc40Q9CRC8 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lrrc40Q9CRC8 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.27□□□□□ -0.28
Lrrc40Q9CRC8 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Lrrc40Q9CRC8 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Lrrc40Q9CRC8 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.27□□□□□ -0.28
Lrrc40Q9CRC8 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lrrc40Q9CRC8 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lrrc40Q9CRC8 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Lrrc40Q9CRC8 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.27□□□□□ -0.29
Lrrc40Q9CRC8 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lrrc40Q9CRC8 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lrrc40Q9CRC8 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lrrc40Q9CRC8 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lrrc40Q9CRC8 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.27□□□□□ -0.29
Lrrc40Q9CRC8 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Lrrc40Q9CRC8 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.27□□□□□ -0.29
Lrrc40Q9CRC8 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lrrc40Q9CRC8 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lrrc40Q9CRC8 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lrrc40Q9CRC8 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Lrrc40Q9CRC8 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lrrc40Q9CRC8 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Lrrc40Q9CRC8 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.27□□□□□ -0.29
Lrrc40Q9CRC8 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lrrc40Q9CRC8 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Lrrc40Q9CRC8 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lrrc40Q9CRC8 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Lrrc40Q9CRC8 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lrrc40Q9CRC8 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lrrc40Q9CRC8 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lrrc40Q9CRC8 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.27□□□□□ -0.29
Lrrc40Q9CRC8 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lrrc40Q9CRC8 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
Lrrc40Q9CRC8 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lrrc40Q9CRC8 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lrrc40Q9CRC8 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Lrrc40Q9CRC8 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lrrc40Q9CRC8 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lrrc40Q9CRC8 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Lrrc40Q9CRC8 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Lrrc40Q9CRC8 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lrrc40Q9CRC8 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lrrc40Q9CRC8 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Lrrc40Q9CRC8 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Lrrc40Q9CRC8 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lrrc40Q9CRC8 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lrrc40Q9CRC8 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lrrc40Q9CRC8 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Lrrc40Q9CRC8 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Lrrc40Q9CRC8 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Lrrc40Q9CRC8 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lrrc40Q9CRC8 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lrrc40Q9CRC8 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lrrc40Q9CRC8 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Lrrc40Q9CRC8 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lrrc40Q9CRC8 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.26□□□□□ -0.29
Lrrc40Q9CRC8 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.26□□□□□ -0.29
Lrrc40Q9CRC8 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC13.26□□□□□ -0.29
Lrrc40Q9CRC8 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.26□□□□□ -0.29
Lrrc40Q9CRC8 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lrrc40Q9CRC8 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lrrc40Q9CRC8 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lrrc40Q9CRC8 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lrrc40Q9CRC8 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lrrc40Q9CRC8 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Lrrc40Q9CRC8 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lrrc40Q9CRC8 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lrrc40Q9CRC8 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.26□□□□□ -0.29
Lrrc40Q9CRC8 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lrrc40Q9CRC8 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lrrc40Q9CRC8 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Lrrc40Q9CRC8 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.26□□□□□ -0.29
Lrrc40Q9CRC8 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lrrc40Q9CRC8 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lrrc40Q9CRC8 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Lrrc40Q9CRC8 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lrrc40Q9CRC8 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lrrc40Q9CRC8 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lrrc40Q9CRC8 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Lrrc40Q9CRC8 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lrrc40Q9CRC8 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lrrc40Q9CRC8 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Lrrc40Q9CRC8 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lrrc40Q9CRC8 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.25□□□□□ -0.29
Lrrc40Q9CRC8 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lrrc40Q9CRC8 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lrrc40Q9CRC8 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Lrrc40Q9CRC8 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms